Gene PICST_29721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_29721 
Symbol 
ID4837485 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp962964 
End bp964914 
Gene Length1951 bp 
Protein Length627 aa 
Translation table12 
GC content39% 
IMG OID640388800 
Productpredicted protein 
Protein accessionXP_001382957 
Protein GI150864222 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0361578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.688101 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAC AACAACATAC GAGCCACGGG AAATCGCTCA TACCACAGAA ACGTATTCTC 
AGCGAAATCA CGAACAGTGT GACAGAACCA AAGGACGACA CTTTCGTAAA GCCAAAGAGG
AGAAATCTGT TGGGATTCGA GTTAGCCAGC ATTCCTCAGA CTAACAAGAT GATGAAGAAT
TCTGATACCG CAATCTTGTC TAATAGACGA CAGCTCAAAC CATCGTCCAT ACCATCGGCT
CCAAAATCAG TTTCTAAGTT GACTCCACAA GAAAGTCTTC GAAGAATGAA ATCTGTGAGT
GCCCGCTTGA AGGCTACCAG TGCCCATGAA GGGTTGTTAC GTAAAGGGCC AGCTCTTGTT
CACAACGACG ACTGGTCCAG AAGCATTCAA GAAAAAGCAC AACGAGATCT CGAAAATAAG
ATGCTGGAGC TCAATAATGA ATTGCGTGTA CTTGAGGAAG AAGAAAGCGA ATGCCACAAA
GATCTAGCCG AATCAAGACG ACAAAAGCAC AAGAAAGAGA AGGAAATCGT GGAGCTTACC
ATAGAATTAG AGGCAGAGCA AGGAAAGCAA GCATTCTTAG AAGAAAAAGT AATCAAGACA
GTATCTGAAC AGGAACAACT TGTAAATTTG GAGCTTGAAG AGTACCGAAT GAAAATGGAA
AATAAACTTA ACGACGTTAA GTTCGAATTG GAGGAACAGA TTGAGGAAGC TAAGTCTTTC
AAGGATGACA AATTGCTTCA AGAAATTGAA CAATTAGAAA CTCAAATCGA ACAATCAAAA
CAAGAACTTG AAAATGGAAA AACACAATGG ACCACCATTT ACAATGAAGA GTCTGAGAAA
TTAGAGAAAG ACATAAATCA AAACATACAA CCCAAGCAAG ACGAGCTTTC AGAACTAAGG
CTGACATTGA ATTTGAAGGA GACGGAAAGA GACAAGGTTG CTTCTGAATT GAAATCTTTG
ATTGAGTTTG CAAGCAAATC GGAATGTGAA AAGGCTCGCA TTTCTTCTGC GATTGTAAGT
ATAGAAACCA GCATGAACAA CTACGTAGAA AGAAGAGAAT CTCTCTTGAA AGAACTTCTG
GAAGTGGAAC AGGAACTCAA TTCAGCAAAG AAAAAGAGCG ACAACAAGGA GAGTCTTGTT
CAGTCCGCAT TGTATGAATA TTCAAAGGCA AACAATAAGC TACTTAAACA TGAACAACAA
CGGAGAATAT TGGAAAATTC AATAATGGAC TACAAGGGCA AGTGCAGAGT ATATGTCAAG
GGTCATAATA GTCAAAATAA TGAGATATAC AGCAACAGCA GATCATTTCG TTTTAATAAA
GTATTTGGTT CCGAGGCGAC AACAGTATCT ATTGCACAAG AGTTTGAATG TTTGGCTAAT
GAATCTGCCA TTGGATCAAA TGTGACAATA CTATTCTGCG GAACGCCTGA CCACATCGGC
GTGAATGCTT CCATAATAAA TAGCTTTAAG AGCATTTTTC AAAAAGCCTC CGTTCAACCA
ACGTGGTCAT TCGCATATAA TTTCAGAAGC ATAGGGTTGC GAAATGATTC GTTGATCGAT
CTTCTCAACT CAAATACCGA GTTAGTACTT GAAAAAATCG AAAACAGTTT GAGCGAAATA
CAATCCCAGA AGATGCTCAT TGGCATTGAT GATATCATCC AGTTCTCAAA AGTTTTGAGT
CAGATAGTAG AAGATCCACA AGACGTTGAT ATCCGCATAC ATATCATAAC AGTTGACAGA
TCTAAGGATG GAAAGGCCAT TGAAAGCAAT TTGACATTTA TAGATATATC CGATTCGGAT
GATCAAGACG CATTGTTGAA CTCGTTAGTA TCAAGGTCCT CATCGGTGTC ATCTAAGTTC
TCCAAGTTTC TTGACTTTTG TCATCGCCAG AGCAAGTGTC TCTTTGTTGG CCAAGTGGAG
CTGGAATCTG AACAGAGTTT CAAACTCTTG A
 
Protein sequence
MSEQQHTSHG KSLIPQKRIL SEITNSVTEP KDDTFVKPKR RNSLGFELAS IPQTNKMMKN 
SDTAILSNRR QLKPSSIPSA PKSVSKLTPQ ESLRRMKSVS ARLKATSAHE GLLRKGPALV
HNDDWSRSIQ EKAQRDLENK MSELNNELRV LEEEESECHK DLAESRRQKH KKEKEIVELT
IELEAEQGKQ AFLEEKVIKT VSEQEQLVNL ELEEYRMKME NKLNDVKFEL EEQIEEAKSF
KDDKLLQEIE QLETQIEQSK QELENGKTQW TTIYNEESEK LEKDINQNIQ PKQDELSELR
STLNLKETER DKVASELKSL IEFASKSECE KARISSAIVS IETSMNNYVE RRESLLKELS
EVEQELNSAK KKSDNKESLV QSALYEYSKA NNKLLKHEQQ RRILENSIMD YKGKCRVYVK
GHNSQNNEIY SNSRSFRFNK VFGSEATTVS IAQEFECLAN ESAIGSNVTI LFCGTPDHIG
VNASIINSFK SIFQKASVQP TWSFAYNFRS IGLRNDSLID LLNSNTELVL EKIENSLSEI
QSQKMLIGID DIIQFSKVLS QIVEDPQDVD IRIHIITVDR SKDGKAIESN LTFIDISDSD
DQDALLNSAS VSLLAKWSWN SNRVSNS