Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_29563 |
Symbol | ALD5 |
ID | 4837252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 570211 |
End bp | 571698 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 12 |
GC content | 48% |
IMG OID | 640388567 |
Product | Aldehyde dehydrogenase |
Protein accession | XP_001382347 |
Protein GI | 126131644 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.161421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCTTGC CATTGTTCGT TCCCATCAAA TTGCCAAACG GCACTACCTA TGAGCAGCCT ACCGGTTTGT TCATCAACAA CGAGTTTGTC CAGTCCAAGT CCAAGAAGAC CTTTGGAACT GTTTCTCCTT CTACTGAAGA AGAGATCACC CAAGTCTACG AAGCCTTCTC CGAAGATATC GATGATGCCG TTGAAGCTGC TACTGCTGCT TTCCACTCAT CGTGGTCTAC TTCCGACCCT CAAGTCAGAA TGAAGGTTCT CTACAAATTG GCTGACTTGA TCGACGAACA CGCCGACACT TTGGCCCACA TTGAAGCTCT TGATAACGGT AAGTCGTTGA TGTGTTCCAA GGGTGACGTT GCTTTGACTG CCGCCTACTT CAGATCCTGT GCTGGCTGGA CCGACAAGAT TAAGGGTTCT GTTATCGAAA CTGGTGACAC CCACTTTAAC TACACCAGAA GAGAACCAAT TGGTGTTTGT GGCCAGATCA TCCCATGGAA CTTCCCATTG TTGATGGCTT CCTGGAAGTT AGGACCAGTC CTTTGTACCG GTTGCACCAC TGTTTTGAAG ACTGCTGAAT CGACTCCTTT GTCTGCTCTT TACTTGGCTT CTTTGATCAA GGAAGCCGGT GCTCCACCTG GTGTTGTCAA TGTTGTTTCC GGTTTCGGTC CAACTGCCGG TGCTCCAATC TCTTCTCACC CAAAGATCAA GAAGGTTGCC TTCACTGGTT CTACCGCTAC CGGTAGACAC ATCATGAAGG CTGCTGCTGA ATCCAACTTG AAGAAGGTCA CTTTGGAATT GGGTGGTAAG TCTCCAAACA TTGTCTTTGA CGATGCTGAC GTTAAGTCCA CCATCCAACA CTTGGTTACT GGTATCTTCT ACAACACTGG TGAAGTGTGC TGTGCCGGTT CCAGAATCTA CGTCCAGGAA GGTATCTACG ACAAGATTGT TTCCGAGTTC AAGAATGCAG CCGAATCACT TAAGATCGGT GACCCATTCA AGGAAGACAC CTTCATGGGT GCCCAAACCT CTCAATTGCA ATTGGACAAG ATCTTGAAGT ACATCGATAT CGGTAAGAAG GAAGGTGCCA CCGTTATCAC TGGTGGTGAA AGATTCGGTA ACAAGGGTTA CTTTATCAAG CCAACCATCT TCGGAGATGT CAAGGAAGAC CACCAGATCG TCAGGGATGA AATCTTCGGT CCTGTTGTCA CCATCACCAA GTTCAAGACC GTCGAAGAAG TCATCGCCTT GGCCAACGAC TCCGAGTACG GTTTGGCTGC TGGTGTTCAC ACCACTAACC TCAGCACTGC CATCAGTGTT TCCAACAAGA TCAATTCCGG TACCATTTGG GTCAACACCT ACAATGACTT CCACCCAATG GTTCCATTCG GAGGTTACTC CCAATCTGGT ATTGGTAGAG AAATGGGAGA AGAAGCCTTG GACAACTACA CCCAGGTCAA GGCAGTCAGA ATTGGTCTTA GCCAGTAA
|
Protein sequence | MSLPLFVPIK LPNGTTYEQP TGLFINNEFV QSKSKKTFGT VSPSTEEEIT QVYEAFSEDI DDAVEAATAA FHSSWSTSDP QVRMKVLYKL ADLIDEHADT LAHIEALDNG KSLMCSKGDV ALTAAYFRSC AGWTDKIKGS VIETGDTHFN YTRREPIGVC GQIIPWNFPL LMASWKLGPV LCTGCTTVLK TAESTPLSAL YLASLIKEAG APPGVVNVVS GFGPTAGAPI SSHPKIKKVA FTGSTATGRH IMKAAAESNL KKVTLELGGK SPNIVFDDAD VKSTIQHLVT GIFYNTGEVC CAGSRIYVQE GIYDKIVSEF KNAAESLKIG DPFKEDTFMG AQTSQLQLDK ILKYIDIGKK EGATVITGGE RFGNKGYFIK PTIFGDVKED HQIVRDEIFG PVVTITKFKT VEEVIALAND SEYGLAAGVH TTNLSTAISV SNKINSGTIW VNTYNDFHPM VPFGGYSQSG IGREMGEEAL DNYTQVKAVR IGLSQ
|
| |