Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_29522 |
Symbol | |
ID | 4837215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 478194 |
End bp | 479615 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640388530 |
Product | predicted protein |
Protein accession | XP_001382327 |
Protein GI | 150863752 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.182383 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGGTA GAAGACGATA TAGTAACGAC AGAGATGGCA CCAAGAGGCA GAAACTAGAA CTGAAAAATG CACGATTCCA TTCAAACAAC CAACCAAACA AACAAACAAA CGACAAATCA GCAAGTTCAG TGCGACTCGG AGCAGTGAGT TCGTCTGAGG CAGGAGTTTC ATCTCAAGCA TCTTCTGAAG GAAAAGGTGG ACTCAATGTA GAAATACATC CTCTTCTCAG AGCTACCGTT CCTACTCCTG CCCTTCCTAA GAACCATAAT CCTCTTTCAC AGAATGTCCG GAAGTGGTTT GATCCCTTTG CCATCAATCC ATACTTGAAA CAGACAGACT CGTCTGTTCC TCAGCATAAA CCAAGACAGT TAGTTTTCAA CCCCAAGGGA AGGTATATAG CACAAGGAGA TGCCCTTCGT GAAAAGATAG CTCTTGAACA ACAGCATAAA AAGGAACTTG AAGAAAAAAA GGCCCGAGGT CTAGCTCCTG ATGAAAGTCT TGGGGAGCAA TTGTACAAAC CCGAACATCC TCCTCTGCTT GAATGGTGGG ATAAGCCATT TGTATTGGAC AGAGACTATT CACAAATTGA AGATTCAACC AGATTGAATT TGAATGATGA AGAACAGCCA GTTTCCATAT ATATCCAGCA TCCTGTTTTC ATTCCACCAC CATGGGAAAA ACTCAATCCT GAAGCCAAAC CCATGTACTT GACCAAGAAA GAGAGAAAGA GAATCAGAAA GAACGAAAGA CTGGAAAAGC ACAAAGACAA ACAAGATAGA ATTAAGCTTG GTCTTGATGC ACCTCCCCCA CCAAAAGTCA AACTCTCTAA CTTAATGAAT ATTCTCACCA ACGAAGCCAT CAAAGATCCT ACTGCTATAG AAATGCGTGT ACGACAAGAA GTAGAAGAAA GACTCCAGAA TCATTTAGCA ACAAACGAAG CTAGGAAGCT TACTAAAGAA CAGAGGCACG AAAAGATACA GGAACAAAGA GAAAAAGACC TCTCTAAGGG ATACTTTACT TCTGTTTACA GAGTAGATAA TCTCAGCAAC CCCCAACACT TCTTCAAGGT GAACAAGAAT GCCCAGCAGC TCGATTTGGT GGGTATCTGT TTGAGAAATC CCAAGTTCAA CTTGATAGTA GTAGAAGGAG GACACAAAAG CATCAAATTC TTTAATAAGC TTCTTACTAA AAGAATCAAA TGGACGGAGA ACGTTGTTCC TAAGCATAGT AATGAGTCTA CACAAGAACT CCAAGACTTG TCTGCTAACA AATGCTATTT GGTGTGGGAG GGCCAGGTCA AAGAGCTTAG TTTCCAGAAA TGGAGTGTGA TGTACTCACG TGATGAATAT GAAGCATTTG ACGTGCTCAA TAGATTTAGG ATCGAGAATT ATTGGAGAGA AGCTTTAGTT GTAGAAAACT AA
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Protein sequence | MSGRRRYSND RDGTKRQKLE SKNARFHSNN QPNKQTNDKS ASSVRLGAVS SSEAGVSSQA SSEGKGGLNV EIHPLLRATV PTPALPKNHN PLSQNVRKWF DPFAINPYLK QTDSSVPQHK PRQLVFNPKG RYIAQGDALR EKIALEQQHK KELEEKKARG LAPDESLGEQ LYKPEHPPSL EWWDKPFVLD RDYSQIEDST RLNLNDEEQP VSIYIQHPVF IPPPWEKLNP EAKPMYLTKK ERKRIRKNER SEKHKDKQDR IKLGLDAPPP PKVKLSNLMN ILTNEAIKDP TAIEMRVRQE VEERLQNHLA TNEARKLTKE QRHEKIQEQR EKDLSKGYFT SVYRVDNLSN PQHFFKVNKN AQQLDLVGIC LRNPKFNLIV VEGGHKSIKF FNKLLTKRIK WTENVVPKHS NESTQELQDL SANKCYLVWE GQVKELSFQK WSVMYSRDEY EAFDVLNRFR IENYWREALV VEN
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