Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_29516 |
Symbol | |
ID | 4836919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 451650 |
End bp | 452294 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640388234 |
Product | predicted protein |
Protein accession | XP_001382849 |
Protein GI | 150864141 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.130222 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGAATA CGCCGTCGGC ACCTAAGATA ACGGCTCAGG ACCGGGCCAT TTTCCAGCTC AAACAGCAAA GAGACAAACT CAAAGACTAC CAGAAGAGAT TGACATTTGT GATTGAGAAA CAGACCAATC TAGCACGTGA GGCTGTCAAA AACGGCCAGA ACGACAAAGC CAAGTTCTAC TTGAGACTGA AGAAACAGCA GGAGACCACT ATTGTGAAGA CATGCGAACA ACTAGACAAT CTAGAAGGAT TAATCGGCAC CATAGAGTTC AAGTTGATTG AGAAAGATGT CATATATGGC TTGGAGCAGG GTAACCTGGT GTTGAAGAAA CTTAACAACG AGATGAAAAT CGACAAAATC GACAAGATCT TGGACGATTT GGAAGAAGAA CGAATCAAGG TGGACGAGGT ATCTGATGCC TTGGGGATGG GCAGTGGTTT AAGTAAGCTG GAAGAATTTG AAGTTGACGA AGAATTTGAA AAACTTGAGC AGGAACTCAA CATTGTAGAA CAGAAGAATG ACACCCAACA AGTTCCTGAA CTTCCTGAAG TTCCTAAAGT GGACGTCTTA CCAGAAGTTC CCAAATCTGA GATTGTTGAG CAACAGCCTA GCAGAGTGCT AGCCAACGAA CCAATAGCAA GCTAA
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Protein sequence | MGNTPSAPKI TAQDRAIFQL KQQRDKLKDY QKRLTFVIEK QTNLAREAVK NGQNDKAKFY LRSKKQQETT IVKTCEQLDN LEGLIGTIEF KLIEKDVIYG LEQGNSVLKK LNNEMKIDKI DKILDDLEEE RIKVDEVSDA LGMGSGLSKS EEFEVDEEFE KLEQELNIVE QKNDTQQVPE LPEVPKVDVL PEVPKSEIVE QQPSRVLANE PIAS
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