| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29006 |
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| Symbol | |
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| ID | 4851743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 2718914 |
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| End bp | 2719756 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | 640393451 |
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| Product | predicted protein |
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| Protein accession | XP_001386851 |
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| Protein GI | 126275454 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1100] GTPase SAR1 and related small G proteins |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.779358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCAGT GGATCGACAG CTTGAAGGTT CTCCTGAATA AATACGACAT CTGCGTTCTT
GGAGAAGAAA ACTGCGGCAA GTCGTCGCTC ATTTTGCATT ACCTTCACAA CAAGTTCATC
GAAGGACTTG ACTCTTCTAT CGAAGACCTC TACACCAAGC CCGTAAGCTT GGGAGGCATT
TATCATGAGA TAACTATCTT GGATACAACA TCTCTTCTGG ACAGTTACTC AACATCTCGT
CGAACCCAGA TTTTGAACAC ATCTACTATC CTTTTCATCT ATGCCATCAA CAACCACGAA
TCGTTCACAG CCATCGAAGA CACCATAGAA AGAATTCAGC ATATACGACC CCAACTCCCT
CCGATGGTTA TTGTAGCTAC GAAATGTGAT TTGGAGGGTC AACGTCAAGT TTCGTATGAA
GAAGGTCAGG AATTTGCTGA AAGAGCTGGT GCCATAGCCT TTGTCGAATG CTCTTCCTTG
TTGGGAATAG GTATTTCGGA AGCTTTCCAG CCTCTCGTCA AGTATGTAGT AGATCGTAAG
ATAGAGGAGC AGAAACAAGA CGACAAGAGC CAGAGCCAGC AAGTAGCTGA TGCTTCAGAA
ATCGAAGAAA CTCCTGAAGT TGTCGGACAA GGAAAGAGCA GTGGGAATGA CATCTTGGAA
CAAGAAAAAC TGAATGTGAA TCCGACAAAA TCTGATGGCT CCAATAATAC TGTGGGAGCG
GACAAGACTC TTACTAATAA GAGCGAGGGC TCAGATGTCA AGGTGAGAAA GATTAACCGT
GATATTCCTT CTCAGGCCAA GAAAGAAGAA ATTGCAAAGA GTGGCTGTTG CACCATAATC
TGA
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| Protein sequence | MSQWIDSLKV LLNKYDICVL GEENCGKSSL ILHYLHNKFI EGLDSSIEDL YTKPVSLGGI
YHEITILDTT SLLDSYSTSR RTQILNTSTI LFIYAINNHE SFTAIEDTIE RIQHIRPQLP
PMVIVATKCD LEGQRQVSYE EGQEFAERAG AIAFVECSSL LGIGISEAFQ PLVKYVVDRK
IEEQKQDDKS QSQQVADASE IEETPEVVGQ GKSSGNDILE QEKLNVNPTK SDGSNNTVGA
DKTLTNKSEG SDVKVRKINR DIPSQAKKEE IAKSGCCTII
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