Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_28949 |
Symbol | AMI2 |
ID | 4851689 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 2549061 |
End bp | 2550733 |
Gene Length | 1673 bp |
Protein Length | 451 aa |
Translation table | |
GC content | 41% |
IMG OID | 640393397 |
Product | Glutamyl-tRNA(Gln) amidotransferase subunit A (amidase) |
Protein accession | XP_001386825 |
Protein GI | 126275269 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.270224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTCG TGTCACTTAA AATTTCGAGG TAAGTATAAA AGGAAAATTG ATCATTCTAA GAACGATTGT CGTTGTTCAA AGTGCACCAC TATCTTAGAT GCAAAAAATA CTAACATTCC AGGGACAACT CTATTACACG AGAGGACTTG CAAAAAACCA AGTAGACAAA TTGAAGGTGA AGTTGAGAGA TGAGGAAAAA GAAGACTACT ACATCTTGCT AGCAGCTATG GATACCTCCA TCAAAAAGGT GTTGGAAATG GACGATTTCT ATCTTCCAAC AGGGCGTTTC CTAGAAAAAA TATACATAGA CCAGAAGGCG CGAATAATGA AGCTAATGTC TGGGCTTATA AGGTTGAGAT AGAGGATACT AAGCCCGAAA TGTCCAAGAG TCGGCCACTC GCTGGTCGTA CAATTACTTT TAAGGATTGT GTAGAAGTTG GAAAAGTTCC TCAAATCGGT GGTACTGATT CATGGAATCC TTAGACTCCT GAAGCGCTAC TGTTGTTACC AGAGTTTTGG AAGCCGGTGC TAAGATTGTA GGTTTAGCTA CTTGCGAAAA CCAGTGTACT TCGACTTCCT CCAGCACTTC CTCTACTGGC AATGTGCCTA ACCCCTATGG AAAATCTCAT TCTGCCGGTG GTAGTAGTTC CGGTTGTGGT TAATTAGTTG GTTCAGGAGA AGTCGACCTT GCCGTAGGTG CTGATCAAGG TGGTTCCATC AGGGTGCCAA GTTGCCAATA TGGCATTATT GGATTGAAGC CAACTTTTGG TCTTATTCCG TACTCGGGTA TCGGTAGCAA CGAGGTCAAC AATGATCATG CTGGTCCAAT GATAAAAGAT GTACTCGACA ATGCGCTTTT ACTCAGTGTA GTTGCTGGTG TAGACGGATT TGACGACAGA CAGATGGGTG AACCACTATA CAGAGACGTA CCTAACTACA TGAATATGTT GAAGGAAAGT TCCATCAAAG GTATGAAAAT TGGAATCTTG AAGGTATCAT TGGAAGTGTC AGCTATGACA GAAGCAATGA AGCAAAAATT ATTACAGCAA GCAAAGTTGT GGGAAGCATT GGGAGCTGAA GTCGTTGAAG TTTCTATACC TTACCATCAC ATCGCTCCTG AAATCTGGAT GACTGGACAA AGAGTAGCAG GTGCCGTCCG AAAATTGGGC ATGCAGTGTG GGAGACGTGT AGTTCAGTCT GTAAAGCCAT TGATCACTGT TACCCCTGGA CTGAAGAATC TTTCGACAAA GCACCAGTTA ACGTCAAAAA CGGTCTTATC AACGGTTTGT ATATATTGGA AAAGCATCCA GGCATCTATT TAAAAACAAT TAACATCAGT TTCAAAGCTA GAGCTGAATA TGACAATGCT CTTAGTACTG TTGATTTATT GATTAAACCA ACAGTTCCCT TTGCTGCTCC ACGTAATGGT GACAGGAATG CTAATCCCAT AACGAGAATT AAGAATACTA TTGGTCTAAA TGCGAACACA GGTATTTTCA ATATTACTGG CCACCCAGCA TTAACTTTTC CAATGGAATT CCTGGCTTCT CAAGAAGATC CAGATATGAA GTTTCCCGTT GGCATACAAA TCATAGGTAA GCACTTTGAC GAAAAAACAG TCTATGCATT TGCATATGAA TGGGAAAAAG CATACAATTG GAAGGTCTAC TAG
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Protein sequence | MSFVSLKISS SYGYLHQKGV GNGRFLSSNR AFPRKNIHRP EGANNEANVW AYKVEIEDTK PEMSKSRPLA GRTITFKDCV EVGKVPQIGV LEAGAKIVGL ATCENQCTST SSSTSSTGNV PNPYGKSHSA GVGSGEVDLA VGADQGGSIR VPSCQYGIIG LKPTFGLIPY SGIGSNEVNN DHAGPMIKDV LDNALLLSVV AGVDGFDDRQ MGEPLYRDVP NYMNMLKESS IKGMKIGILK VSLEVSAMTE AMKQKLLQQA KLWEALGAEV VEVSIPYHHI APEIWMTGQR VAGAVRKLGM QCGRRVVQSV KPLITVTPGL KNLSTKHQLT SKTVLSTHPG IYLKTINISF KARAEYDNAL STVDLLIKPT VPFAAPRNGD RNANPITRIK NTIGLNANTG IFNITGHPAL TFPMEFLASQ EDPDMKFPVG IQIIVYAFAY EWEKAYNWKV Y
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