| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28862 |
|---|
| Symbol | GHL2 |
|---|
| ID | 4851604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 2292409 |
|---|
| End bp | 2293089 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 640393312 |
|---|
| Product | ATP-dependent RNA helicase |
|---|
| Protein accession | XP_001386786 |
|---|
| Protein GI | 126275008 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.535981 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTTAG GTTTGATATC AGCATATTCA ACAATCCACG TCAATTATTC GGTTATGACG
TACTCTGAGA AGGTCGAGTA CGTTACTGGT TTGGTCGCTA AGATTAGTGA CACGTCGGTC
AGTACTACTG TTCAGTTATC GGCTGCCAAG CTGCTTTCTA CCTACTTTGC TGAGCAGCCT
CCTACTGACA TTCCTGGTCT CCTCTATCTT ACACACTGTA AGCTGGACCA TATTTTGTCT
AAGTTCAAGG AACTTGGTGC TACCTTGGAT CTCACTGACC TCAAATCGTT CCTAAAACGG
ATCGATGCCT CACTGTCTTC CACGCCTGGG TCTGTGTTCA CGGTGACTAC TCTCTCCTCT
GCTGGACTGA AGTCTCACCA GAAAGCTCCT GCCACCTCTC CTATCTGGAA TACCCGTTGC
TATACGTGCT CTGGTAAGGG CCACCGTTCG AATGTTTGTA CTTCCCCTGT TCTCAAGTGT
ACCAATTGTC TTGGTAATGG CCACAAGGCC ACTAGCTGTC CTTCTCCTGT TCGTACTGGA
CATTTCCTGT CGTCCCGTAC CTCTCTGTCT CCTCGTGTTC ATTCTTTTTC TACTGCCGCT
GGTGATGCCT TTGCATCCAC CCCATCCACC CAGGCGTATT CCCTCAATGT ATCCCCTGTT
GAAATTCAGA AGCATTCATA G
|
|---|
| Protein sequence | MLLGLISAYS TIHVNYSVMT YSEKVEYVTG LVAKISDTSV STTVQLSAAK LLSTYFAEQP
PTDIPGLLYL THCKLDHILS KFKELGATLD LTDLKSFLKR IDASLSSTPG SVFTVTTLSS
AGLKSHQKAP ATSPIWNTRC YTCSGKGHRS NVCTSPVLKC TNCLGNGHKA TSCPSPVRTG
HFLSSRTSLS PRVHSFSTAA GDAFASTPST QAYSLNVSPV EIQKHS
|
|---|
| |