Gene PICST_28225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_28225 
Symbol 
ID4851001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp681834 
End bp682217 
Gene Length384 bp 
Protein Length127 aa 
Translation table 
GC content41% 
IMG OID640392709 
Productpredicted protein 
Protein accessionXP_001387770 
Protein GI126273962 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0672955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAATTG ATCTAGCATC CACTCAGCCA ACTAAAACGT CACAATACAG TAGGGTTGAT 
TCCAAAATCC CCAAAACACA AAGTGACACC GGAATCCATT TCAAATGGAT TTTCACGTTG
CAAGAATTGC TAACTGAAAA GGTAGAAGAA GCAAAACTTG TAGTTCAAAA CATTGAGGAT
AAGGGTGAAT ACTTTGCAAA AGGAGATATA CCAGTTGGAG CTATTGGTCT TCTAGTTCAC
ACAAAGAGTG AGCCAGCTGC CTTTGCAGGA TGGTACCAGG AAGGACACCA GGGAGACTGG
AGTGTTTACG GAGACCAACC AGAAAACAGT CAACAAACAT ATTTGATAAA CGGTGCCGAG
ACCATCTTTG TTGGTTTGTT TTGA
 
Protein sequence
MIIDLASTQP TKTSQYSRVD SKIPKTQSDT GIHFKWIFTL QELLTEKVEE AKLVVQNIED 
KGEYFAKGDI PVGAIGLLVH TKSEPAAFAG WYQEGHQGDW SVYGDQPENS QQTYLINGAE
TIFVGLF