Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_28046 |
Symbol | |
ID | 4850831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 181411 |
End bp | 182124 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | |
GC content | 42% |
IMG OID | 640392539 |
Product | predicted protein |
Protein accession | XP_001387686 |
Protein GI | 126273616 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.18282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTACCA GAGATTCCAC CTATTCGTAT GTCCATATAG ATGACCCCAA TCAGGTGATA TACATGGAGA AGTGGCAGGA TGACCCGATT CCATTTGACG ATATTGATAC ACAGCAGTTG CTAGAAGCTA CAGCCAATTT GTTCCCTCAG CTTTTGTTAG AGGAAGAGGA AGATGGGGCC ATACCGATTC AGCCTGCCAC ATATGGAGCA AAGGCATACA AGAATCGACA ATTGTTGAAG GATAAGATCT GGAATGACTT TGGCATTTTT GAGAAGTTTC TCAACGAATC GAGTTCACTT AACAAACAGG TTGATAAGAC TATACTAGGA TCGATGTACA CGAAAAGTAA TGAGCATTTT GATGGAGATA TAGCCGATGG AGGCGAGGAT ATCGTCAAAA GAGAAAACGG CTTCACAGTA GCAGATTATC TTTCTAATGG GTTCACAATG AACGACAACA CAATGGATAT ATTATCACCG ACTGATATGG CTAATGATAG CATAATGGGG GTTCACCATG GAGATATCTC ATTGAACTCG ACATCAGATC TTCCAGGAGG AGCCAACAAT ACGTTTTTCA ATGCCAGATC CAACTCAATA GGGTATGGCA ATCAAGCAGG AGTTGCGGCT GTGCAGACCC CACGAGTAGG AAGAACCAGA CAAACATCTA CCGATAAAAG TTTCCAAACA CCCATTACAA GAATAATGAG GTAA
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Protein sequence | MSTRDSTYSY VHIDDPNQVI YMEKWQDDPI PFDDIDTQQL LEATANLFPQ LLLEEEEDGA IPIQPATYGA KAYKNRQLLK DKIWNDFGIF EKFLNESSSL NKQVDKTILG SMYTKSNEHF DGDIADGGED IVKRENGFTV ADYLSNGFTM NDNTMDILSP TDMANDSIMG VHHGDISLNS TSDLPGGANN TFFNARSNSI GYGNQAGVAA VQTPRVGRTR QTSTDKSFQT PITRIMR
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