Gene PICST_22975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_22975 
Symbol 
ID4840411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp1305707 
End bp1306069 
Gene Length363 bp 
Protein Length121 aa 
Translation table12 
GC content45% 
IMG OID640391726 
Productpredicted protein 
Protein accessionXP_001385602 
Protein GI150866113 
COG category[K] Transcription 
COG ID[COG5248] Transcription initiation factor TFIID, subunit TAF13 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.984982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CGTAGAAAGA GAAAGCAGAG ACTTTTCCAA AAGGACATCG AGAACTTGTT GTTTGCAATG 
GGAGATCGTC CCGTTCTGAC GGATATGCTG GTTCTTGCAC TTGAAGAGAT CTTGGTGGAG
TATTTGCTGG ACTTATGCCA CCTGACCATG GCATATTCCA GATCTCAGGG TAGATCGAGA
ATCAAGATGA ACGACTTAGC TTTTGCGTTG AGGAACGACC CGTTGAAGCT TGCAAGATTC
CAGTACACCA TCGAGCAGAG TTATCGTATT GAAAAAGCGA AGAAGATGTT TGAAGAGAAT
ACAGATGCGG TGGGTGCTAG TGTAGGAAAT CAGGATTCAG ACGAGGAAGA GGATGACGAA
GAG
 
Protein sequence
RRKRKQRLFQ KDIENLLFAM GDRPVSTDMS VLALEEILVE YLSDLCHSTM AYSRSQGRSR 
IKMNDLAFAL RNDPLKLARF QYTIEQSYRI EKAKKMFEEN TDAVGASVGN QDSDEEEDDE
E