Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_21174 |
Symbol | NDT802 |
ID | 4840816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | - |
Start bp | 547957 |
End bp | 548694 |
Gene Length | 738 bp |
Protein Length | 246 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640392131 |
Product | DNA binding transcription factor |
Protein accession | XP_001386699 |
Protein GI | 150866934 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.110005 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TCTTCAAAAC AATATAAGAT AGGGCCACCA ATGACCAAAA CTGTCATTCT ACGTCAGACG TATTTGTCTT CCAATGGCGA ACTCATCAAC CCCCTAATTT GGGCTAGAAT AGATAGAGGG TTTGACTTCA AAAACGGCGA ATGGATAGGA TACAAGAGAA ACTACTTTAC CTTGGTATCG TCTTTTGAGT TTCCACAGAA AGAACTTTCA ATTCTTGAAA ATGACAGTGT CTATTTGCTT GATCCTGAGG GAACCCAAGT GCCTGTTCAT TTCTTTGCTC TAAGGCTCAT TTCCACATGT ATAGAAGACA ACTTTGAGGC TCCGTTGGCA CAACATACAG CAAAAAGAGA CAGAGGACCG CTGTATCCTC CGCGCATCAC TCCTGTTATT CCAGCCAGGA TTCCTAGTCA TCTAGTCATG AAAGAGAATG CCAACATAAG AAACTTACTG AAGCTCAAGC TATTCAATAG GTACTTTTAT TTGGATCCTC AACACAGGAA GAAGGTAAAG CCAAAATCAA TGCTAAATAC TTATCCTGAA ATGGAAGTTT CGAGGGCCGT AAACTACGAT AGAGTCCAAT ATGCTGCTTC CTTTCAATAT AGAAAATCCC CCCCTGGAAA GAGGCACTAT GTGCTAAGGG TTGAACTTCT AGCATACCCG AAGGATATGA GTCCGATTAC TGTAGCTTAT ACGGAAACCC CACCACTAAT AGTCCGGGGA AGATCACCTT CCAGTTAT
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Protein sequence | SSKQYKIGPP MTKTVILRQT YLSSNGELIN PLIWARIDRG FDFKNGEWIG YKRNYFTLVS SFEFPQKELS ILENDSVYLL DPEGTQVPVH FFALRLISTC IEDNFEAPLA QHTAKRDRGP SYPPRITPVI PARIPSHLVM KENANIRNLS KLKLFNRYFY LDPQHRKKVK PKSMLNTYPE MEVSRAVNYD RVQYAASFQY RKSPPGKRHY VLRVELLAYP KDMSPITVAY TETPPLIVRG RSPSSY
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