| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_21007 |
|---|
| Symbol | |
|---|
| ID | 4840105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009046 |
|---|
| Strand | - |
|---|
| Start bp | 142039 |
|---|
| End bp | 142587 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640391420 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001385721 |
|---|
| Protein GI | 150866208 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CTTCCACACT TTCCCGAAGA TATAAAGGGT GTAGATGAAA ACGCCTATTC TTTATTATAC
AAGAACAAAG TTCAAAAACC TATGCCAGTA CTTATGTCAA ACGAATTTTT CAGTCTTATC
TTCTTTCCAA GTGACCACTT CGTGTCTTCC TACAGAAAAT CGAACATTTC TTATACATTT
ACCAACTATG GACCACTGAA GTTGAATAGT CAAGTTTTGG AAAAGGCCAT TAACAGCTAC
AAAGGCAAAT ACCGATCTAC TACATTTTTC CAAGAGAATC TTCAGCCTTT CACAACGGCA
GTCGGGAGAT CCAACAATAG AAAATTAATG AAGCGGTGTC TTTTCAATGC CTTGTGTGAT
CAGGTTAAGA CTCAAGATCA ACTAGTGAGT GTTTCTGGAA TCTTCAGGTT TAGATTTCTT
CTGGTTCCTG TAACAGATAA GGACAAATCA AAGGTACAGC GTGATATCAG CAATTCTGTT
AACAGAATAC TAGAAGATCG AATGTACCGA CTGCTCCTAA GTAGTGGTAC TAAAAAGAGT
AATCAAGCA
|
|---|
| Protein sequence | LPHFPEDIKG VDENAYSLLY KNKVQKPMPV LMSNEFFSLI FFPSDHFVSS YRKSNISYTF
TNYGPSKLNS QVLEKAINSY KGKYRSTTFF QENLQPFTTA VGRSNNRKLM KRCLFNALCD
QVKTQDQLVS VSGIFRFRFL SVPVTDKDKS KVQRDISNSV NRILEDRMYR SLLSSGTKKS
NQA
|
|---|
| |