Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_19764 |
Symbol | |
ID | 4838094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 949483 |
End bp | 950148 |
Gene Length | 666 bp |
Protein Length | 222 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640389409 |
Product | predicted protein |
Protein accession | XP_001383811 |
Protein GI | 150864830 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.296451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.782052 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TCTGAAAATG ACTTTCTTAC AACTATATTC GATAACATGG ACCCATATTT GGATACGTAT GCTGTATATT CTCAACTCGT GGAGGCTGGC TTTACACCAT CACAAGCCGA TGAAATCATT AACTTCTTGG TTGTGCAATT AAACTCCAAG CTATCTAAAT TATCAACAAA ATTTGCTCAA GAGTACGAAT TGGAGAATGA AAAGTATCTC TTTGAAAGCG CTCAACAGGA ATTACGTGTA GACATCACAA GATCCAGAGA ACAGCATATC AACGAGTTGA TCACCCTTAT TAGTATTTTG GAAAGAGATT TCCGTGTGAT ATCAGATGAG TTAAATAACG AGTTTCTTCA GCTGAACAAC GATGTCCAGG TCGCTATCAA CGACCAAAAG TCGGAAAACA CATTGCAAAG TAAGAGAATA ATCTTGAAAA TCCAAGAGAC CAACCATAAA ATCACCACCG AATTAAATTC AGCGATGAGG TCAGAAATCG AAAGTTTGAG ATGGCATCTT TCAAGATGGG GAGTGATTGC TATCCTTGTC TCAGTTTTTT CAGGATGCGC TGCTTTCTAT GCTCAAAGAG CAAAAGCAAA TAGAGAAGAA CAGTCCAAGA GCGACTTCGT TCCTTTGGTT ATCTACGAAC CAAGTGAATA TGACGATGAC GACTAC
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Protein sequence | SENDFLTTIF DNMDPYLDTY AVYSQLVEAG FTPSQADEII NFLVVQLNSK LSKLSTKFAQ EYELENEKYL FESAQQELRV DITRSREQHI NELITLISIL ERDFRVISDE LNNEFLQSNN DVQVAINDQK SENTLQSKRI ILKIQETNHK ITTELNSAMR SEIESLRWHL SRWGVIAILV SVFSGCAAFY AQRAKANREE QSKSDFVPLV IYEPSEYDDD DY
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