Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_18667 |
Symbol | RRN7 |
ID | 4837406 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 566978 |
End bp | 568315 |
Gene Length | 1338 bp |
Protein Length | 404 aa |
Translation table | 12 |
GC content | 38% |
IMG OID | 640388721 |
Product | RNA polymerase I specific transcription initiation factor RRN7 |
Protein accession | XP_001382346 |
Protein GI | 150863764 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.143542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACCTC AGTCATGGTT CCGTGGTCCC GTCTGTGGCG TGGACAACTG TCGCTCGCGA CTATATCGGT CCAGTGACGG TTTAACTATC TGTCAATTTG GTCATGTGAT GGAAGGAAAT ATTGAGATCA ACGATGATCA AGATCAAGTT ACAGTTACAA CAAGAAGATT GAACGTTGTT AATGTTGACG AAAGAGGTGG GTATACCAGT TCACCTGTTG TTAACTCACA GAAAGCGATT TCTAAGAAAA GCACTAGACT TTACGGCTCA GAGGCCAGAG AGTTATATTT CAAATGTTTG CAAATGCTTC TCAAGAAGCA ATGCGAAATT TTCATGACTT TATTCTTCTC GGAATCTATG AGAGACGATT TGTTTCAATT GGTCAAAACC AATTGGGTTA AATGTCTAGG AATTACGTAC GAGCACAAAA ACAACGAATT GGATGATCAT ACCAACGAAA GTAACGAGGA CGAAGAAAGT GAGAAGGAAG AGCAGGGTAA AGACGACGAC GGACAAAATA CTAAGAAAGA GAGAATAAAA GTCGAATCGA AGTACTATAC TGTGAATACT TTGGACTTGA TATCTTTGAT CTATATATCT GCCCTACAGC TACGATTTCA ACTGATTTAT ATTAATGACA TCGTTAAACA TATAAAATCC AATGAGATCC CTTATGTCAG AACTCTCCAT ATTTTGCCCA AAAGTACTTT GGATAAATTG CCCATGCCCT ATCATCACAT GTTGCAGCCC CTTCGTTTGC CACTGCAGTT GGATTTGTAT CATTGCATCC GTATAAATGG TTTGCGTTTA AAAGTAGGAA AATTGGATAT GCCACTCAAT TACTATTATC CATTTGCATT TAAGGTGTTT TCAGATATTT TTCTTTTTCC AAATGCCATT GACTTGTTCA ACGTCTTCAC CAACTTAATG GAAGCAATTC TGTTGACCGA ATTGCTGTTT TCATTTACCT ACAAGACAAC TGTATTAGGT GTAATAGGTT TCCCTGAGAT TCAGATTTTG GGGGCTATAG TCTTTGTTAT CAAGCTCACA TTCGTAAGCA ATCCTTTTAA GTACATGCTT CACCCAAAAG TTTGGCTTGA TAGACTCGGC AAATTCGAGA TGAATAACGA ATACTCCTAC ATTAAATCCG ACAACAGCGA CCTTCTCGAT TGGTCAGACG ATAAGATCGA GAAGTATTGT GATTGGATAT ACGACCACAT CATTCCAAAA AAGAATAAAA CCTACAATTT AGATGGGGAT CACGAAGACT ATCTAGTGGG ACAGCAAGAA GAGTTGACTA CGATGGAAAA AAGGCTTTTC CAAATATTTA ATGTAGAT
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Protein sequence | MAPQSWFRGP VCGVDNCRSR LYRSSDGLTI CQFGHVMEGN IEINDDQDQV TVTTRRLNVV NVDERGGYTS SPVVNSQKAI SKKSTRLYGS EARELYFKCL QMLLKKQCEI FMTLFFSESM RDDLFQLVKT NWVKCLGITE KEEQVESKYY TVNTLDLISL IYISALQLRF QSIYINDIVK HIKSNEIPYV RTLHILPKST LDKLPMPYHH MLQPLRLPSQ LDLYHCIRIN GLRLKVGKLD MPLNYYYPFA FKVFSDIFLF PNAIDLFNVF TNLMEAISLT ELSFSFTYKT TVLGVIGFPE IQILGAIVFV IKLTFVSNPF KYMLHPKVWL DRLGKFEMNN EYSYIKSDNS DLLDWSDDKI EKYCDWIYDH IIPKKNKTYN LDGDHEDYLL TTMEKRLFQI FNVD
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