Gene PICST_17474 details

Gene Information

• Locus tag: PICST_17474
• Symbol: HYR5.1
• ID: 4840042
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Scheffersomyces stipitis CBS 6054
• Kingdom: Eukaryota
• Replicon accession: NC_009046
• Strand: -
• Start bp: 990088
• End bp: 994134
• Gene Length: 4047 bp
• Protein Length: 580 aa
• Translation table: 12
• GC content: 45%
• IMG OID: 640391357
• Product: hyphally regulated cell wall protein
• Protein accession: XP_001385882
• Protein GI: 150866327

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 20
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTTATTTC GAAATTATTT CGCAGCTGCA TTCTGCTTGA TCTCAGGAGT GGTGGCTAGG 
ACCATCACTC AAGATACTGT CAGTCGTGGT ACCATATCTC TTGGATTGGG TGACACTATC 
ATTAATGATG GTGTTTATTG GTCCATCATT GATAACGTAG TAACAGCCTT TGCAGGTAAT 
GTCGACGTGG GCACAGGCTC TGGTTTATAC ATCACAGGTC TCAATCCTTT ACTTTCCTTA 
CAAGTAACCC TTTTGCTGGG TTCTCTTACA AATGATGGTG TTATCGCCTT TAATGCCATT 
CAATCTTTAC TCGCTCCAAC ATACAATCTT GTCGGTATCT CGTTTACAAA TAATGGTGAA 
ATGTACTTAG GTGCCGATGG ATCAGTTGGT ATTCCCAGCA TCCTGATTAC CACTCCAGTC 
TGGAACAATA ATGGTTTATT GGTCTTCTAC CAAAATACCA GAACGACTGG TCCTGTTAAT 
TTGGGTACCA TTGGTAGTAC GATTAACAAC AATGGCCAAA TTTGTTTTTA CAATGAACTA 
TATACCCAGA CGACAAATAT CGCAGGTACT GGTTGTATTA CTTTAGTCGA AGACTCTAGT 
ATCTTCTTCT CTAATACTCT ATTGAACATC GATACAAATC AAGTCTTCTA TTTGGAAGAC 
TCTGCCTCCT CAATCAGAGC CACCGCCATT AGTGCCCCTA AAACTTATAC TGTGGCTGGG 
TTCGGTAACG GAAACAAGAT TGGTTTAGAT ATTCCACTTG TCAATATTCC TCCATTGCTC 
ACAGGTTACA CATATAGTAC TACCACAGGT ATTTTGACTC TTAAAGGTGC AGGTGTGTTG 
GCCATGAACT TCAACATTGG TAAAGGCTAC AATCCATCTC TTTTCTCCAT TGTCACTGAC 
GACGATGTTG GATTAGCTTC GGTTCTCTTC GGTGCAGTTT CCTACTCAGG ACCTCCTCCA 
AACCCAGTTC CTTCGATTTG TAAGCAATGT AAAACGCTTC CCCCTGCACC AGGAACCAGT 
CCGACCGTAA CTACGACCAC AGTAGCAACT ACGAATACTG CTGGATTCAC TTGTTCAGAA 
GTCGATCAAA TCCTTGTTTC CACAGATACC AATTATTCTT GGTTCACATC TACTTCAACT 
ATTACTGTAC TGTGTCCTTC AAACCCAACA ACTACAGTAA CTTCTACTTG GACAGGTTCT 
CAAACTACCA CCGTCACTGT TACTGACACA GTTGGAGGCA CTGACACCGT GATTGTTGAA 
GTTCCATCTA ACGAACAGAC TACTCTCACT TCGACCTGGA CTGGTACCGA AACTACCACT 
GTCACGTTAA CCGATACACA AGGAGGCACT GACACAGTTG TAGTTGAAGT CCCTTCCAAT 
GAACAAACCA CTCTCACTTC GACCTGGACT GGTACCGAAA CTACCACTGT CACGTTAACC 
GATACACAAG GAGGCACTGA CACAGTTGTA GTTGAAGTCC CTTCCAATGA ACAAACCACT 
CTCACCTCGA CCTGGACCGG AACTGAAACC ACCACAGTTA CTATTTCCGA CACAGTCGGC 
GGTACTGACA CTGTCATTGT TGAAGTTCCA TCTAACGAGG AGACTACTGT TATTTCTACA 
TGGACAGGTA CTGTCACCAG CACAGTTACT ATTTCGGACA CAGTCGGCGG AACGGACACA 
GTAATTGTTG TTGTTCCTTC TACTCCAAAC AGTCAGACCA CTCTTACTTC GACCTGGACT 
GGTACTGAAA CTACCACAGT TACTATTTCC GACACAGTTG GGGGTACTGA TACTGTCATT 
GTTGAAGTTC CATCTAACGA ACAGACTACT CTTACTTCGA CCTGGACTGG TACTGAAACT 
ACCACAGTTA CTATTTCCGA CACAGTCGGC GGTACTGACA CTGTCATTGT TGAAGTTCCA 
TCTAACGAGG AGACTACTGT TATTTCTACC TGGACTGGTA CTGTCACCAG CACAGTTACT 
ATTTCAGACA CAGTCGGCGG AACGGACACA GTAATTGTTG TTGTTCCTTC TACTCCAAAC 
AGTCAGACCA CTCTTACTTC GACCTGGACT GGTACTGAAA CTACCACAGT TACTATTTCC 
GACACAGTCG GCGGTACTGA CACAGTTGTA GTTGAAGTCC CTTCCAATGA ACAAACCACT 
CTCACTTCGA CCTGGACTGG TACCGAAACT ACCACTGTCA CGTTAACCGA TACACAAGGA 
GGCACTGACA CAGTTGTAGT TGAAGTCCCT TCCAATGAAC AAACCACTCT CACCTCGACC 
TGGACCGGAA CTGAAACCAC CACAGTTACT ATTTCCGACA CAGTCGGCGG TACTGACACT 
GTCATTGTTG AAGTTCCATC TAACGAGGAG ACTACTGTTA TTTCTACATG GACAGGTACT 
GTCACCAGCA CAGTTACTAT TTCGGACACA GTCGGCGGAA CGGACACAGT AATTGTTGTT 
GTTCCTTCTA CTCCAAACAG TCAGACCACT CTTACTTCGA CCTGGACTGG TACTGAAACT 
ACCACAGTTA CTATTTCCGA CACAGTTGGG GGTACTGACA CTGTCATTGT TGAAGTTCCA 
TCTAACGAAC AGACTACTCT CACTTCGACC TGGACTGGTA CTGAAACTAC CACTGTTACG 
TTAACCGACA CACAAGGAGG CACTGACACT GTCATTGTTG AAGTTCCTTC TACTCCAAAC 
AGTCAGACCA CTCTTACTTC GACCTGGACA GGAACCGAGA CAACTACAGT TACTATTTCC 
GACACAGTTG GAGGTACTGA CACTGTCATT GTTGAAGTTC CATCTAACGA ACAGACTACT 
CTCACTTCGA CCTGGACTGG TACTGAAACT ACCACTGTTA CGTTGACCGA CACACAAGGA 
GGCACTGACA CTGTCATTGT TGAAGTTCCT TCTACTCCAA ACAGTCAGAC CACTCTTACT 
TCGACCTGGA CAGGAACCGA GACAACTACA GTTACTATTT CCGACACAGT TGGAGGTACT 
GACACTGTCA TTGTTGAAGT TCCTTCCAAC CCTCAGACAA CTGTTGTGTC AACTTGGATT 
GGCACTGAAA CTACTACTGT AACTGTTACG GATACCGTAG GAGGTACTGA TACAGTTGTC 
ATCGTTGTTC CACCAAATCC AACCACTACA GTTACTTCTA CCTGGACCGG AGTAGATACT 
ACAACCTTAA CATTGACAGA CACCCAAGGT GGTACTGATA CTGTTGTTGT TGAAGTTCCG 
TCTAATGCCC AGACTACTGT TACTTCGACT TGGACTGGTA CTGAAATTAC TACTGTTACT 
ATTTCGGACA CAGTTGGTGG TACCGACACT GTAATAGTCG AAGTTCCATC CACTGCAAAC 
ATTCAAACAA CTCTTACTAG TACGTGGACT GGTTCTGATA TCACTACTAC AACAGTGACC 
GACACGCCAG GAGGAACCGA TACCGTTATT ATTGAAGTTC CAACCACTGC AAACAGTCAA 
ACAACTCTCA CATCCACCTG GACCGGAACA GAAACTACTA CTGTTACATT AACGGATACC 
TTAGGTGGCA CTGACACTGT CATTGTTGAA GTTCCTTCTA CTCCAAACAG TCAGACAACT 
CTTACTTCGA CCTGGACTGG TACTGAAACT ACCACAGTTA CTATTTCCGA CACAGTTGGA 
GGTACTGACA CTGTCATTGT TGAAGTCCCT TCAAACGTAG AGACAACTGT TATTTCTACA 
TGGATCGGAA CTGTAACTAC TACTGTTACT GTAACTGATA CCGTAGGTGG AACTGATACA 
GTTATCGTCG TTGTCCCACC AAATCCAACC ACTACAGTTA CTTCTACCTG GACCGGAGTA 
GATACTACAA CCTTAACATT GACAGACACC CAAGGTGGTA CTGACACTGT TGTTGTTGAA 
GTTCCATCTA ACGAACAGAC TACTCTCACT TCGACCTGGA CTGGTACCGA AACAACCACT 
GTTACGTTAA CCGACACACA AGGAGGCACT GACACCGTAA TTGTTGAAGT TCCATCTAAC 
GAACAGACTA CTCTCACTTC GACCTGG 

 

Protein sequence

MLFRNYFAAA FCLISGVVAR TITQDTVSRG TISLGLGDTI INDGVYWSII DNVVTAFAGN 
VDVGTGSGLY ITGLNPLLSL QVTLLSGSLT NDGVIAFNAI QSLLAPTYNL VGISFTNNGE 
MYLGADGSVG IPSISITTPV WNNNGLLVFY QNTRTTGPVN LGTIGSTINN NGQICFYNEL 
YTQTTNIAGT GCITLVEDSS IFFSNTLLNI DTNQVFYLED SASSIRATAI SAPKTYTVAG 
FGNGNKIGLD IPLVNIPPLL TGYTYSTTTG ILTLKGAGVL AMNFNIGKGY NPSLFSIVTD 
DDVGLASVLF GAVSYSGPPP NPVPSICKQC KTLPPAPGTS PTVTTTTVAT TNTAGFTCSE 
VDQILVSTDT NYSWFTSTST ITVSCGTDTV VVEVPSNAQT TVTSTWTGTE ITTVTISDTV 
GGTDTVIVEV PSTANIQTTL TSTWTGSDIT TTTVTDTPGG TDTVIIEVPT TANSQTTLTS 
TWTGTETTTV TLTDTLGGTD TVIVEVPSTP NSQTTLTSTW TGTETTTVTI SDTTPKVTTL 
TSTWTGTETT TVTLTDTQGG TDTVIVEVPS NEQTTLTSTW