Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_17369 |
Symbol | HYR5.3 |
ID | 4840749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | + |
Start bp | 157023 |
End bp | 158198 |
Gene Length | 1176 bp |
Protein Length | 392 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640392064 |
Product | hyphally regulated cell wall protein Exo-alpha-sialidase |
Protein accession | XP_001386047 |
Protein GI | 150866442 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTTCC TAGATCTTTA TTTTGTTGCA GTACTCTTCC TGATAGCAAC TGTATGGGCC AAAACCATTA CTGAAGATAC CATCGATAGA GGAGCCGTTG CTATAGATGC AGACGAAACG ATCATCGTGG ATGGTGTTTA CTGGTCTCTT GTTGATAATG ACTATACTAA TTTTGCAGGT AATGTAGACG TAGGTGAAGG TTCTGGCTTC TACATCTCCA ACACATCGCC TTCAAGCATG TACGTTGCCA TACTTTCTGG CCTGTTCGTC AACGATGGGA TTACGTCTTG GAATGCTATT GAAGCGATAA ATGCTCCAAC CTTTAACATA GATGGCTTTA ATTTCATCAA CAATGGTGAA GTGTACATGT CAGCCGACGG TTCTACTGGC AACCCTTCTA TGGGAATTAC AACTACAAAT TTTGATAACA ATGGTTTGTT GGTCTTCTAC CAAAATTATA GAACTGGCAA TTCAGTTGAA TTAGGTGATG ATCTTCTTAC AATTAACAAC AATGGCCAGA TTTGTTTGCA CAACAAACTT TACGCACAAA GAACTTCTAT TGCTGGTACT GGTTGTATCT CCGCCGTGGA CGATTCCAGT ATATTCATCC AATATTCGGC ATTGGATATT GATACTAACC AAGTTTTCCA TTTGCAAGAC TCTAATTCTA ACCTACGCGC TGCAGCCGCT ATAACACCAA AAACTTACAC TGTCGCAGGC TTTGGTAATG GAAACAAGAT TGGATTGGAC TTTGCTCTTC AGACTCTTAA TCCTTGGACA TATGATCCTG TTAGTGGCAT ATTAACTCTT CGATCAACAT TATTATCTCA AAGATTTAAT ATTGGGACAG GATACGACCC AGCATTGTTC TCAATTACAA CCGAGTCTGG TTTAGGTTTG TCAACTGTCA CACGAGGTGC ACTCACCTAT TCAGGACCCC CTCCAAACGC AATTCCAGAA GTCTGCCAGC CATGTCCAGT ACCTCCTGAA GCTCCAGGAA TGGATCCAAT AGAGTACACT ACAACAATCG TGACGACGAA CCCTGATGGA TCAATTTGTA CTGAAGTTGC CGATGTTCTA GTTAGCACCG ATGCTGACCA TATATGGTAC ACTACCACAA ATAGTGTTCA GACAGACTGT TTAGCGGCTA CTATTTACAC TACAACGTTC ACCACT
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Protein sequence | MLFLDLYFVA VLFSIATVWA KTITEDTIDR GAVAIDADET IIVDGVYWSL VDNDYTNFAG NVDVGEGSGF YISNTSPSSM YVAILSGSFV NDGITSWNAI EAINAPTFNI DGFNFINNGE VYMSADGSTG NPSMGITTTN FDNNGLLVFY QNYRTGNSVE LGDDLLTINN NGQICLHNKL YAQRTSIAGT GCISAVDDSS IFIQYSALDI DTNQVFHLQD SNSNLRAAAA ITPKTYTVAG FGNGNKIGLD FALQTLNPWT YDPVSGILTL RSTLLSQRFN IGTGYDPALF SITTESGLGL STVTRGALTY SGPPPNAIPE VCQPCPVPPE APGMDPIEYT TTIVTTNPDG SICTEVADVL VSTDADHIWY TTTNSVQTDC LAATIYTTTF TT
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