Gene PICST_17369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_17369 
SymbolHYR5.3 
ID4840749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp157023 
End bp158198 
Gene Length1176 bp 
Protein Length392 aa 
Translation table12 
GC content41% 
IMG OID640392064 
Producthyphally regulated cell wall protein Exo-alpha-sialidase 
Protein accessionXP_001386047 
Protein GI150866442 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTCC TAGATCTTTA TTTTGTTGCA GTACTCTTCC TGATAGCAAC TGTATGGGCC 
AAAACCATTA CTGAAGATAC CATCGATAGA GGAGCCGTTG CTATAGATGC AGACGAAACG
ATCATCGTGG ATGGTGTTTA CTGGTCTCTT GTTGATAATG ACTATACTAA TTTTGCAGGT
AATGTAGACG TAGGTGAAGG TTCTGGCTTC TACATCTCCA ACACATCGCC TTCAAGCATG
TACGTTGCCA TACTTTCTGG CCTGTTCGTC AACGATGGGA TTACGTCTTG GAATGCTATT
GAAGCGATAA ATGCTCCAAC CTTTAACATA GATGGCTTTA ATTTCATCAA CAATGGTGAA
GTGTACATGT CAGCCGACGG TTCTACTGGC AACCCTTCTA TGGGAATTAC AACTACAAAT
TTTGATAACA ATGGTTTGTT GGTCTTCTAC CAAAATTATA GAACTGGCAA TTCAGTTGAA
TTAGGTGATG ATCTTCTTAC AATTAACAAC AATGGCCAGA TTTGTTTGCA CAACAAACTT
TACGCACAAA GAACTTCTAT TGCTGGTACT GGTTGTATCT CCGCCGTGGA CGATTCCAGT
ATATTCATCC AATATTCGGC ATTGGATATT GATACTAACC AAGTTTTCCA TTTGCAAGAC
TCTAATTCTA ACCTACGCGC TGCAGCCGCT ATAACACCAA AAACTTACAC TGTCGCAGGC
TTTGGTAATG GAAACAAGAT TGGATTGGAC TTTGCTCTTC AGACTCTTAA TCCTTGGACA
TATGATCCTG TTAGTGGCAT ATTAACTCTT CGATCAACAT TATTATCTCA AAGATTTAAT
ATTGGGACAG GATACGACCC AGCATTGTTC TCAATTACAA CCGAGTCTGG TTTAGGTTTG
TCAACTGTCA CACGAGGTGC ACTCACCTAT TCAGGACCCC CTCCAAACGC AATTCCAGAA
GTCTGCCAGC CATGTCCAGT ACCTCCTGAA GCTCCAGGAA TGGATCCAAT AGAGTACACT
ACAACAATCG TGACGACGAA CCCTGATGGA TCAATTTGTA CTGAAGTTGC CGATGTTCTA
GTTAGCACCG ATGCTGACCA TATATGGTAC ACTACCACAA ATAGTGTTCA GACAGACTGT
TTAGCGGCTA CTATTTACAC TACAACGTTC ACCACT
 
Protein sequence
MLFLDLYFVA VLFSIATVWA KTITEDTIDR GAVAIDADET IIVDGVYWSL VDNDYTNFAG 
NVDVGEGSGF YISNTSPSSM YVAILSGSFV NDGITSWNAI EAINAPTFNI DGFNFINNGE
VYMSADGSTG NPSMGITTTN FDNNGLLVFY QNYRTGNSVE LGDDLLTINN NGQICLHNKL
YAQRTSIAGT GCISAVDDSS IFIQYSALDI DTNQVFHLQD SNSNLRAAAA ITPKTYTVAG
FGNGNKIGLD FALQTLNPWT YDPVSGILTL RSTLLSQRFN IGTGYDPALF SITTESGLGL
STVTRGALTY SGPPPNAIPE VCQPCPVPPE APGMDPIEYT TTIVTTNPDG SICTEVADVL
VSTDADHIWY TTTNSVQTDC LAATIYTTTF TT