| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_16323 |
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| Symbol | CTA8 |
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| ID | 4838236 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 1024255 |
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| End bp | 1026132 |
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| Gene Length | 1878 bp |
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| Protein Length | 599 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640389551 |
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| Product | Heat shock transcription factor |
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| Protein accession | XP_001383484 |
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| Protein GI | 150864599 |
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| COG category | [K] Transcription |
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| COG ID | [COG5169] Heat shock transcription factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.173191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0871257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAACT TCGAGGATAA GCACGATCCT ATCGTTGAAC TTCTCAACTC GGGTGCTGGA
GAGCATGACG AAGATATCAA AGTGATTAGT AGAGATCCGT TCAGCGATAA CTTCGTAGCT
ACACCAACCA CAGCTCAGCT CTTGGATCCC AGCTATCACA TAAAGGACGA GGAAAAAAGC
AATACGAATA AGAATAGCAA CGCAGGCAAC AATAATAGCA GTATCAGCAA TATCAACAGC
ATCAACAGTA CTAGTAATAT CCATCACAAC AGTGTAAACC ACAGTAATAA TAGCAATAAT
AATGATAATT ATGACGATTT TCATACTTTC CATACTGGGG CTACCCCCAT AGAGCCAACC
GGACTAACAC CAATGCTTGC ACCAGCACCT GATTTTGTGC CGCATGCCAA CAACCAGATC
GCCTACATCA ACAAATCCAG CTTTTTGAAC CCTTTGCCTC CTATGGCTCC ACTTTCAGAA
CTGGTCCTTC CCAACGGAAT CAATATAAAC CCTCTAGCAT TGAACGGATC GAGTAAACTT
TCTAACGATG ACAAGAAAAC TATAACCAAT AACAGTAGTG CTGTGAGTAG CTCTAAAAGG
AAAAAGGAAC CAGCTGGACC CAAAACTAGA CCTCTTTTTG TTACTAAGAT ATGGTCTATG
GTAAACGATC CAGACAACCA GGAATATATC CGTTGGAACG AAGATGGAAA GACTTTTCAG
GTTTTCCATA GAGAAGAATT CATGAAGTAC ATATTACCCA AATACTTCAA GCACAGTAAT
TTCGCTTCCT TTGTCCGTCA ATTGAACATG TACGGATGGC ACAAAGTACA AGATATCAAC
AGTGGAACTT TCAACCTGGG AAAGGGAGAT AAAGGCATGG AAGAAGTGTG GCAATTTGAG
AATCCAAATT TCATTAGAGA TAGAGAAGAT TTATTGGACA AGATTATTAG AAACAAGAGT
GTTTCCCAAG AGAGTGAACA CGACAACAAC GCCGTCAACT TCCAGATCCT CCTCAATGAA
TTAGACAGCA TCAAGATGAA CCAATTGGCT ATTGGTGAAG ATTTGCGTCG CGTCAGAAAA
GATAACAAAA CATTATGGAA CGAGAATTAC ATGACAAGAG AAAGACACCA ACAGCAAGCC
CAAACTCTTG ACAGAATCTT GAAGTTCTTA GCTGCTGTTT ATGGTAACAA TACTGGCAAG
ATTCTAGAAG TAGATAATGG TCCAGAGTAC AATGATGGTC AAATGACTGC CTACAATCCT
GGCCAGCCCC CATCGCCTAA CCCCTACGCT CAACAAATGT ACGCTCCAAT ACAGAAGCCA
ATGCTTATGC TCACGAATCA AGCACATGGA CCTAGTCCGT CTGGTTCTAC GTATAAATCT
CCTAGACAAA CTTCAATATC TAGTTCTAAC AACAGGGATC ATAGAGATAG TTCCATTACG
GACTCGGGTT CGATCGAAGA AATTATAAGA TCCTACGGAA ACACTCCCAG AAATGGCGAG
AGAAGTGGCG ATGCTGCGAA CAATGTGAAT AGGATATATC AACAGATTAT CAACCAGGAG
CCTTCGGCTG CTTCCCCTAG ACATTACTTC CCTGAGTTGA ACAACAGTGG AATGCCACAG
AGTCCTTATG TTGGCCCCAG CACTCCATCG AACCAACAAT TTTTACGAGT GGCAACTCCT
GATAATGCCA ATGACTTAAT GAATGGTTTA GAGCAAAATA TTTACAAGCA GGGACAGCTG
ATTCAGCAAG TTCAAGACTG GATCCAGAAA CTTGCTTCAC AGCAGCAGCA ACAACAGGCC
TCAATTAACG AAATTAATGA CGAAATCAAG CACGATTTAG ACAGTTTTGA TGTTAACGAG
TTTTTGAATA ACACTAAC
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| Protein sequence | MANFEDKHDP IVELLNSGAG EHDEDIKVIS RDPFSDNFVA TPTTAQLLDP SYHIKDEEKS
NTNKNSNAGN NNSSISNINS INSTSNIHHN KPTGLTPMLA PAPDFVPHAN NQIAYINKSS
FLNPLPPMAP LSESVLPNGI NINPLALNGS SKLSNDDKKT ITNNSSAVSS SKRKKEPAGP
KTRPLFVTKI WSMVNDPDNQ EYIRWNEDGK TFQVFHREEF MKYILPKYFK HSNFASFVRQ
LNMYGWHKVQ DINSGTFNSG KGDKGMEEVW QFENPNFIRD REDLLDKIIR NKSVSQESEH
DNNAVNFQIL LNELDSIKMN QLAIGEDLRR VRKDNKTLWN ENYMTRERHQ QQAQTLDRIL
KFLAAVYGNN TGKILEVDNG PEYNDGQMTA YNPGQPPSPN PYAQQMYAPI QKPMLMLTNQ
AHGPSPSGST YKSPRQTSIS SSNNRDHRDS SITDSGSIEE IIRSYGNTPR NGERSGDAAN
NVNRIYQQII NQEPSAASPR HYFPELNNSG MPQSPYVGPS TPSNQQFLRV ATPDNANDLM
NGLEQNIYKQ GQSIQQVQDW IQKLASQQQQ QQASINEIND EIKHDLDSFD VNEFLNNTN
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