Gene PICST_14509 details

Gene Information

• Locus tag: PICST_14509
• ID: 4838180
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Scheffersomyces stipitis CBS 6054
• Kingdom: Eukaryota
• Replicon accession: NC_009043
• Strand: -
• Start bp: 469963
• End bp: 473379
• Gene Length: 3417 bp
• Protein Length: 1084 aa
• Translation table: 12
• GC content: 41%
• IMG OID: 640389495
• Product: predicted protein
• Protein accession: XP_001383724
• Protein GI: 150864756

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 13
• Fosmid unclonability p-value: 0.644497
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

AAGCTGCTCC AAGCCGCTGA GAAGGCGGAG AACAACTGCC TAGTGGAGAT TCTCGGAGCT 
GTTAAGCCGG CCCGCTCCTC CAAGTCTACC ATCACCTCCA TAGTACGAGG ATTGTACACC 
AAGAACGCAA AGTTGTTAAC CATCTTGGAC GCAGACATAA AGGAAGTGAT AGACAATCCC 
GAATTCGAAC TCGACACCTA CAAAGGGTTT GTCAATAGTT TCATTCTCTG GCTTGATGCA 
GATGCCATGG TGTTGTTTGA CAAGTACGCA GCCTTCATAA CCAGCAAGGA TAGCTACCAC 
AACTTCACGA ATTTGGACAA AGTAGAATCA TTTGCGGGAC CCCTAACTAA CTGTGTACAT 
TATCTTGATT TCATTGCTGC CACTTCGAAT CTTTTGAGAA ATCCGTTTGT TATCGATAAG 
TTGTCCACAA TCAAGGAGTT CATGGAAAGA CTTCTTAATA ACTACCGAGA GCTTCTCGAG 
CTGAGCCGTT TGAATGATAT CGGTTTTGCC AACATCAATG CCTTCGTGAC ACCCACAACA 
CCTACAGTAA CCCACAAGCC TCCTTCCAGA GGCCCTCCCA AAGTCTCGGG TATTTTCAAG 
TTGGAACAAA TTGTCGAAAG AACAAAAGAT GAGCCTCTTT TGCTTCACGA CAAGGATCAC 
AAGGAAGTGC CCATAGAGTT GGTTTTATTG GATATTGGTG GCAGTAGAGG TTCTCATGGT 
AAGAAGTACA ACTCATTGGC TATTCTCCAG GTCCATTCTG GAACAAAGGA GTTCAGTAGA 
TCGTTAATGT TTCCTCCCTT TAGAGTCAAC GAGGTATCTG TAGATTTCAA GAGGGATACG 
TTGTTCTTGA AAGCTATCAA TTTCTCTCAT CCCGAGAATA CAGACTCAGT TATCTCCATA 
ACTGGGTTGG ATTCCCAGTT TTTGTATGAC TGGCACAAGA AGCTCACAGC CATTTTCCCA 
GAGGAAGCAA AACATTCGCC AGTAGGGGAG GACTCCTTCT TGATTACTCC TGTAAATAGT 
CCCACCAAGA TGGCAGGATT AGGCATCAAT GTTCTTTCTG ACTCTGAACA CAAACAGGAC 
ATTAAGGACA GAGAAGAACA GCAAAAATAC CACACTCCAC AGAAACCCAA GCTCTACATC 
CAAGAGACTT CGGAGCAGTC GAGTTCACCA TTGTCACAAT TGGAAAAACA TTTCCGCAAC 
TCGATCCAGA AACTGAATGG AACTAATGAG ATACCAATCT TGCCTCCTCC ACCTCCAGCA 
TTCCAGTTGA GAAAACCATC TTCGACTTCG ATTCAATCTG AAGACTCTTC CGACTCAGCA 
AAGACTCAAT ATGATCGCAG TTTGAGCATC ATAGAAAAAA CTGTTTCTTC AACTACATTG 
GCTCGTTTGG TATCGACAAA AGCTGACGGA GACACATGCC CAACCAAGGT TATAAACAAG 
AGAACAATGG AATCTTCCTT GGACTGTGAT GCGGGAGGAC GTCCTATTTC TTCTCAGGGC 
GAAATCGTAG ATGTAGAAGG CACACCAGTA ATGATTAAGG CTCCTACATT GCCCAATATT 
GTAACAGAAA CTGGTAGATT ATCTTTGTCT GACAAACACC ATTCTGGACA GCAAACTAAA 
TTTTCATCTG TTCCCGACCT TGCCACTGGC CGTAGTTCAA ATTTGTATCA ATTGTCGACT 
GGCTCTGAAA TTGATATTTC TAATTTCGGC AAGGACTACC GTCCTTCGTT TGCTGAATCT 
GAAGTCTCCA TAAATTCTAA AAAGGGATCT TCTCCTTCTG TTGGGTCTGG CACCCCGGGA 
ACTCAGAAGA AGCCAACAAG AAAAAAGTCG TTGTTCAACC TTTTCAAAAA GGGATCTAAA 
GCAAACTTAA ACGATAATGT GGCTGGTTTC CAAATGGTTA ACAAGTCCGT AGATTCAGTT 
TCTACAAATA CCAACTTGGC AAACAAATCA ATGGATTCAA CTTCGAGTGT TTTCAATACA 
GCAAATAGAT CGTTGGTCAC GTCTTCAAAG CATTTCAACG CAGCTGATCA ATCTTTTAAT 
TCCTTTTCCT CAAGCATTTT GAACAAGAAA GACTCTGATG ATTCGGTTAC TTCGAGTATT 
TCTACTAACG ACTTGATGAA GAAGGACTCG GATGCAACTC TTAATTCTTC AACAAAGAAT 
AGTAAGGTGG ATCAGGTTGA TGCTGGAAAC CCTACAAATA AGAGTGAAGA ATCAACTCCC 
TCTACTGAAT CCAGTAGATC AGCAATTCCA ACTGCATTTG CATTGCCATC TTCAACTTCA 
ACATACTTCT TCAAACAGTA CAAGAACGGT TCAAGTGCAA GCCTCGGTCA ACACAACGAC 
TCGCAGACTA ACTTGGAACT TCTAGAAAGC ACAGAGGAAG AATTGTTTGT GTCTGATGAA 
ATCAAGTCCA TGATCAACGA CGATCACTCA ATAGAATTTT TCATTACAGA AGCCACGCCC 
AAGGCGATGA AGGTGTCAAA ATGGAAACCT AAGTATGGTA AGTGGGAAAT GATCACAGTT 
AACGAGAATT TGTTTGCAAG AATTGTTACC AACTATCATC TTAACAAGAG TTGGATAATA 
TTCTTCAAAC AGGATACTGA TGCAAACAAT GCTGAAATTG ATAAGCCAAT CTTATTGTTG 
GACATCGTTG GAGGGCAAAC TTCAGTCAAG CTTAATGCTT TGGACTTGCA AATCTCTTCC 
ATTAATTCCG TTACTTCTGA AAAGATGCAA ATTATGGTCA GATGCAAGAC TTCGGCATTG 
GGAAACAGCA TTCTTACCAA CGTCAATAAT GTTATGGGGG TTTTGTCAGC AAATGCAAAG 
AATAATAATT ACGGATCCTT ACAAAACTCG GAGTTAGCAC CATCTTCTTT TACAATAACC 
TCTTCAATAA TGGATGGAAA GTGCCAACCA AGTGCATCCA CTACTTATAG CAGTTTCAGT 
TCGAGTGAAT CAAGGTCAAC CACTAAATCG GCAAAACCAA TTTCGAGAAT GAAGAAAGGT 
GGCTCAGATT ATTCAATCAA TTCCCAAGAG GCGGCCAATC TCAACATCCT CACTAACCCT 
GACAACACCA AGTTGATCTT GTTGAATCAG ATGCCCGTCA GGTTGCAAAA GCAGCTAGAA 
TCTTATAACA GCATCAGCAC GCCTTCTTCA TGGAAAATTC TTTCCATGTA CAGTTTAACT 
GTATATCTGA TAACCGAATC CTTCACCAAC AAGTCATATT TCAACTTGGT GTTGAAAAAA 
ACTGATATAG AGAGCAAAGC TGAAACAGAG TTCAACTGGT TGATTCGTGA TGCAGAGATG 
TATAAACGTA TCGAACGAAT TGGAAAAGCA GGTTTACTTG TCAAAGTCAC AAACGATGAT 
ATTTTCATGA TAGAATGCAA GGGCCGAAAG GAATTACACC AGTTAATAGG CATCTTC 

 

Protein sequence

KSLQAAEKAE NNCLVEILGA VKPARSSKST ITSIVRGLYT KNAKLLTILD ADIKEVIDNP 
EFELDTYKGF VNSFILWLDA DAMVLFDKYA AFITSKDSYH NFTNLDKVES FAGPLTNCVH 
YLDFIAATSN LLRNPFVIDK LSTIKEFMER LLNNYRELLE SSRLNDIGFA NINAFVTPTT 
PTVTHKPPSR GPPKVSGIFK LEQIVERTKD EPLLLHDKDH KEVPIELVLL DIGGSRGSHG 
KKYNSLAILQ VHSGTKEFSR SLMFPPFRVN EVSVDFKRDT LFLKAINFSH PENTDSVISI 
TGLDSQFLYD WHKKLTAIFP EEAKHSPVGE DSFLITPVNS PTKMAGLGIN VLSDSEHKQD 
IKDREEQQKY HTPQKPKLYI QETSEQSSSP LSQLEKHFRN SIQKSNGTNE IPILPPPPPA 
FQLRKPSSTS IQSEDSSDSA KTQYDRSLSI IEKTVSSTTL ARLVSTKADG DTCPTKVINK 
RTMESSLDCD AGGRPISSQG EIVDVEGTPV MIKAPTLPNI VTETGRLSLS DKHHSGQQTK 
FSSVPDLATG RSSNLYQLST GSEIDISNFG KDYRPSFAES EVSINSKKGS SPSVGSGTPG 
TQKKPTRKKS LFNLFKKGSK ANLNDNSVDS VSTNTNLANK SMDSTSTDQS FNSFSSSILN 
KKDSDDSVTS SISTNDLMKK DSDATLNSST KNTIPTAFAL PSSTSTYFFK QYKNGSSASL 
GQHNDSQTNL ELLESTEEEL FVSDEIKSMI NDDHSIEFFI TEATPKAMKV SKWKPKYGKW 
EMITVNENLF ARIVTNYHLN KSWIIFFKQD TDANNAEIDK PILLLDIVGG QTSVKLNALD 
LQISSINSVT SEKMQIMVRC KTSALGNSIL TNVNNVMGVL SANAKNNNYG SLQNSELAPS 
SFTITSSIMD GKCQPSASTT YSSFSSSESR STTKSAKPIS RMKKGGSDYS INSQEAANLN 
ILTNPDNTKL ILLNQMPVRL QKQLESYNSI STPSSWKILS MYSLTVYSIT ESFTNKSYFN 
LVLKKTDIES KAETEFNWLI RDAEMYKRIE RIGKAGLLVK VTNDDIFMIE CKGRKELHQL 
IGIF