Gene PICST_12788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_12788 
Symbol 
ID4837103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1599527 
End bp1600318 
Gene Length792 bp 
Protein Length264 aa 
Translation table12 
GC content43% 
IMG OID640388418 
Productpredicted protein 
Protein accessionXP_001382530 
Protein GI150863896 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.837038 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAAA GAAAGTCCGG AGACAAGGGA AGCGGTGGAA AGAGCAAGAA GTTCAAAGCT 
AGCGGCTTCA TCGACCCACA TACTACTGGT GTATATGCTA CATGCAACAG ACACAAGGAA
CAAGCCTGTA GAAAAGAGTT GATGAACTTG TTTGAAGAGA AGATAGGCGA ATATTTTGAC
TTAGAGAATG GAGACAACTC GGAGGATGAA GGGCAGCAAG ACGAGGACAA AGAGCTTTCG
ATAGAAGAAC AGATACAGAA GGAGTTGGAA GGATTGAAGG AAGTCAAAGG TACCAAGAAA
GAGCTTCTCA AGCCTATCGA GTTAGACTGC GAATGTCTTG TCTTTATAAA AACCAGACGT
CCTATTGATC CCGAAGTGTT GGTAGAACGC ATATGTCAAG AGAGTTACGA ATCAAAGATC
AAGAATACGA GATACACCCA AAAACTTACA CCGGTGACTT TTTCTGTGAG TCCTACGAAG
GAAGAGTTGA AGAAACTAGC CCTGAGAGTG CTTGCTCCAC ATTTCCATAA GCCCGAGGGC
CAGGAACCTA TCAAATTTGC TATTCAGGTG TCAAGACGTA ACTTCAATGC CATGCCCAAG
GATGAGATCA TAAAGTCAAT TGCAGAAAGT GTAGGTAGAG ATCATGGCCA CTCTGTAGAC
TTGAAGAACT ACGATAAGAT TATCTTGGTA GAATGCTACA AGACTTCCAT TGGTATGAGT
GTAGCCAACA ACTACTTGAA GTACGATAAG TTCAACTTGC AGCAGATCTT TGAAAAAGGT
GTAAATAAGG AC
 
Protein sequence
MGKRKSGDKG SGGKSKKFKA SGFIDPHTTG VYATCNRHKE QACRKELMNL FEEKIGEYFD 
LENGDNSEDE GQQDEDKELS IEEQIQKELE GLKEVKGTKK ELLKPIELDC ECLVFIKTRR
PIDPEVLVER ICQESYESKI KNTRYTQKLT PVTFSVSPTK EELKKLASRV LAPHFHKPEG
QEPIKFAIQV SRRNFNAMPK DEIIKSIAES VGRDHGHSVD LKNYDKIILV ECYKTSIGMS
VANNYLKYDK FNLQQIFEKG VNKD