Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_12788 |
Symbol | |
ID | 4837103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 1599527 |
End bp | 1600318 |
Gene Length | 792 bp |
Protein Length | 264 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640388418 |
Product | predicted protein |
Protein accession | XP_001382530 |
Protein GI | 150863896 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.837038 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAAAA GAAAGTCCGG AGACAAGGGA AGCGGTGGAA AGAGCAAGAA GTTCAAAGCT AGCGGCTTCA TCGACCCACA TACTACTGGT GTATATGCTA CATGCAACAG ACACAAGGAA CAAGCCTGTA GAAAAGAGTT GATGAACTTG TTTGAAGAGA AGATAGGCGA ATATTTTGAC TTAGAGAATG GAGACAACTC GGAGGATGAA GGGCAGCAAG ACGAGGACAA AGAGCTTTCG ATAGAAGAAC AGATACAGAA GGAGTTGGAA GGATTGAAGG AAGTCAAAGG TACCAAGAAA GAGCTTCTCA AGCCTATCGA GTTAGACTGC GAATGTCTTG TCTTTATAAA AACCAGACGT CCTATTGATC CCGAAGTGTT GGTAGAACGC ATATGTCAAG AGAGTTACGA ATCAAAGATC AAGAATACGA GATACACCCA AAAACTTACA CCGGTGACTT TTTCTGTGAG TCCTACGAAG GAAGAGTTGA AGAAACTAGC CCTGAGAGTG CTTGCTCCAC ATTTCCATAA GCCCGAGGGC CAGGAACCTA TCAAATTTGC TATTCAGGTG TCAAGACGTA ACTTCAATGC CATGCCCAAG GATGAGATCA TAAAGTCAAT TGCAGAAAGT GTAGGTAGAG ATCATGGCCA CTCTGTAGAC TTGAAGAACT ACGATAAGAT TATCTTGGTA GAATGCTACA AGACTTCCAT TGGTATGAGT GTAGCCAACA ACTACTTGAA GTACGATAAG TTCAACTTGC AGCAGATCTT TGAAAAAGGT GTAAATAAGG AC
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Protein sequence | MGKRKSGDKG SGGKSKKFKA SGFIDPHTTG VYATCNRHKE QACRKELMNL FEEKIGEYFD LENGDNSEDE GQQDEDKELS IEEQIQKELE GLKEVKGTKK ELLKPIELDC ECLVFIKTRR PIDPEVLVER ICQESYESKI KNTRYTQKLT PVTFSVSPTK EELKKLASRV LAPHFHKPEG QEPIKFAIQV SRRNFNAMPK DEIIKSIAES VGRDHGHSVD LKNYDKIILV ECYKTSIGMS VANNYLKYDK FNLQQIFEKG VNKD
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