Gene PICST_11329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_11329 
SymbolMUP2 
ID4838634 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp166821 
End bp168398 
Gene Length1578 bp 
Protein Length459 aa 
Translation table12 
GC content42% 
IMG OID640389949 
Productmethionine permease 
Protein accessionXP_001384330 
Protein GI150865207 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.408127 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AAGGAGAAAT TAGGCACGCT TTCGTGCATC TCCCTTATCG TGAACAAGAT CATAGGAACT 
GGAATCTTTC TGAATCCGCT GATCATCTTC AAATATACCA ACGGCAATGT GGGGCTATTT
CTCCTGCTTT TTCTTGTGGG AGGAATCATC ATTTTCTGCG GCTTGCTTAT CTACTTGGAG
TTTGCCTTGA ATTTACCATT CAAGAACGGA GGCGAGAAGA ATTACTTGCT CAGAGTATTT
GATAGGCCCA AGGGTCTTAT GGGATGTGTG TATTCTTTTC TGATTGTGCT ATTAGGATTC
AGTTCCGGTA ACTCATATTC ATTTGGCAAA TACATATTGT ATGCCATCAC AGACCACCAG
GAAGGAGATT CCACCGACGA TGCAATGGTG AAAGTGATAG GCGTAGTCTG TATTTCCTTC
TGTATCTTCT TGCATACGAA ATATCCCAAC CAGGGCACAA AACTTTTCAA CTTCTTAGGA
GTATTCAAGA TCTTGATCTT AGTTCTTATC ATCGTGTTGG GGTTATTTGT ATCATTGAAC
ATTATAGACG TTCCTGCTAC GGACAACTTT TCCAACGTGT GGAAGTTTCA CAACGACCAG
AAACCAAACT TGTACAATGT ATCTGTAGCC TTGCTCGAGG TGATCTACTC CTTCAAAGGA
TGGGAAAATG TCAACTACGT ACTTAACGAA ATCGATGACC CCTATCACGT ATTAACCATA
GCAGCCCCTG CAGCTGTTTT GCTAACTACT GTCTTGTACT TTATGGTATT GATTGCCTAT
TTAATCGTCA TACCTAAAGA TGAGTTACTC AGCAGCGGTG TATTAGTCGC AGGGATATAC
TTCAACAAGA TCTTCGGTGA AAGCGTCACC TCCAGACTAC TTCCCATCAT CATTTCATTG
TCCAATTTGG GAAATGTTCT CGTAGTCTCA TACGCTCACA GTGTAGTTAA CCAGGAATTG
GCATACAACA ACTACTTGCC ATTTCTGCGA TACTTCCAGA ACTTGAACCA CTCGTTGCTC
TTGCATTGGT TCATCACTGT AGTCATCCTT GTAGCTCCAC CATCTACTGA AATCTACGAG
TTCATCGTCA ATCTCTACAT CTATCCAGGT ACCTGGATCA ACGTAGCCTT GACTGCTGGT
TTGATCTACT TGAAGTTGAA TAGAAAACAA GAGCGCTGGA ACGAATTCAA TCCTATAGAC
CACAACAAAG AAGCTGACGA TGATTACATA GAACACGCAG ATGAAGAGGA ATTTTTGGAA
GACGAGGACG GAGATGAAGA CTCCGTAGTA AACTACAACC CTAGAAGAAG AAGATCTGAA
CATGATAACT TATTGAGAGT ATCAGCGTCA CAGAGTTCGC TTTCTTTGTC ATCTTCAGCT
AATAAGATCG TCTCAGCTCC TATGGTGTGT GTTATTATTT TTCTCTTAGC CAATATCTTC
CTAGCCGTAT TTCCATTTGT TCCTCCTCCA AACGCTGCTG ATATGGATAT TCCATTCTGG
TGTTTCCCAG TTATTGGTTC TGGAGTATTC TTCCTTGGGG TTATATTCTA CTACGCAAGA
CCGTGGGTAC GTCTATGG
 
Protein sequence
KEKLGTLSCI SLIVNKIIGT GIFSNPSIIF KYTNGNVGLF LSLFLVGGII IFCGLLIYLE 
FALNLPFKNG GEKNYLLRVF DRPKGLMGCV YSFSIVLLGF SSGNSYSFGK YILYAITDHQ
EGDSTDDAMV KVIGVVCISF CIFLHTKYPN QGTKLFNFLG VFKILILVLI IVLGLFVSLN
IIDVPATDNF SNVWKFHNDQ KPNLYNVSVA LLEVIYSFKG WENVNYVLNE IDDPYHVLTI
AAPAAVLLTT VLYFMVLIAY LIVIPKDELL SSGVLVAGIY FNKIFGESVT SRLLPIIISL
SNLGNVLVVS YAHSVVNQEL AYNNYLPFSR YFQNLNHSLL LHWFITVVIL VAPPSTEIYE
FIVNLYIYPG TWINVALTAG LIYLNSLSLS SSANKIVSAP MVCVIIFLLA NIFLAVFPFV
PPPNAADMDI PFWCFPVIGS GVFFLGVIFY YARPWVRLW