Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_11262 |
Symbol | |
ID | 4851739 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 2703910 |
End bp | 2705475 |
Gene Length | 1566 bp |
Protein Length | 502 aa |
Translation table | |
GC content | 41% |
IMG OID | 640393447 |
Product | predicted protein |
Protein accession | XP_001387085 |
Protein GI | 126275438 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0642487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.387343 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATAGTCG ATATCGCCAT AGACGACAAC GGCAAGCAGC TCTACCAGGT CCACGAATCA TCCAAATCCG TCAGGAGGGA GATGCCCCAT TCGGCCAACT TCTCCAACTC CTTCCACACC GACGAATCTT CTATCTTTGT GAAGCACGAA GAAAGAACCC CCGTACGCAG AGTCCTTGGT ACGCTTTCAC CCACCACCTT GAACCTGAAG AAGCTCGAAG AGCACCTGAC AGAGTTCGAG GACGATTCAG TTTCTAGCGA CAGAAAACTC ACCTCTGCTG CGAGTGAATA TATCGCCACA TCTGAGGCTG TATCATCTGA CCTCTTTTCC AACTTCGAGC CCGATCACAT CACAGGTGAC CCTTCAATGA CAGAAGTCAG CCAAAGTCTG TCTACTAGTT CCTCCAGAAG CCAAGACAAT GATATCTGGT CTGAGGATGT TGAACAGGCC TTCGAAGAGG TGCTAAACAT CATCCCCAAG AATGGCTTGA ATAAAATCAA AATTTCGGGT CGCTCATGCG GCAGGAACGA ATTAATCTCA GATTACATAT TCACCAAAAC TGGAAAATTC AGAACCAGGA AACAAGTCTC CAGTCATATC CAAGTGATCA AGAACTTGGG GCAGAAATTG CACATTATTA AGTTGATCAA TGAAGGTCCT GTTTTTGAGA CGGACGAAGA ACAACAAGAG TGCAACAAGA AATTCGAAGA AATATTTTCC AAGATCAACT TGAACAAATC ATTGGGCTTC AACGAAAGTG TTTCCATGTC TGGTATTAAG CGCAAGAACC CATCCATGAT GTCTACTCTG GGGATTAACA AAAGGCCAAG AAGGAAGTCT GGAAGACAAA CAATTCAGAA TACTTCACAT CATATATCAT TCCAAGGCTT CTTTATGTCA ATTGATGATA CGTTTTCTGC TAGTCCAACC CCATACATAT TGACAGTGCA AGACCTGAAT CAGGAGGTCA AGAAACTTGT CATTAAAGAA AACGCAAACA TTACTAATAG ATTTCCTGGT TTGGACAATT TCCAAAATTG TAATACTATT CCAATCATAC ACAATATGGT TAAAATTCAT TTCTCGAACC TCGCGGGTAA TTATTCTATA GATGGTGGAT TCAGATCCAA TTTTTTACTT CGTTGGGACG ACTTGGAAGA ATCTTCCAAG CTCTACTCGA CTTTTACTTG CATATATTCT TTTGGAAAGG AAGTGCTTAA ATTTACTGAA GAAGGGTTTA AATTCAATGA GAACAGAGCT TTCTTGGTAA AGTTCTGGAA GTTTTTCTTG ACTAAGTTGA TCGGTAAAGA AGAAAATGAA GCCAACTCTG CCTTCAAGGG AATGACTATT AAACAAATAG TTTACGAGTC AGACTCTGAA TCTGAATCTG GTGAGACTAC TGAATCTCAA AATGTTGTCC CAGTGCTGAA AATTAAGTTG GTATTACTTT GGGAATTTGG CAAAGTAGCC GAATTCAAGG ATGCTGTAAC TACTACAAGT AAATTGATTT TACCTTCTAA GATTGTTTCA TCTAATGAAA ACATTGTGCC GCAAGTAGTC GATTAT
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Protein sequence | LIVDIAIDDN GKQLYQVHES SKSVRREMPH SANFSNSFHT DESSIFVKHE ERTPVRRVLG TLSPTTLNLK KLEEHLTEFE DDSVSSDRKL TSAASEYIAT SEAVSSDLFS NFEPDHITDN DIWSEDVEQA FEEVLNIIPK NGLNKIKISG RSCGRNELIS DYIFTKTGKF RTRKQVSSHI QVIKNLGQKL HIIKLINEGP VFETDEEQQE CNKKFEEIFS KINLNKSLGF NESVSMSGIK RKNPSMMSTL GINKRPRRKS GRQTIQNTSH HISFQGFFMS IDDTFSASPT PYILTVQDLN QEVKKLVIKE NANITNRFPG LDNFQNCNTI PIIHNMVKIH FSNLAGNYSI DGGFRSNFLL RWDDLEESSK LYSTFTCIYS FGKEVLKFTE EGFKFNENRA FLVKFWKFFL TKLIGKEENE ANSAFKGMTI KQIVYESDSE SESGETTESQ NVVPVLKIKL VLLWEFGKVA EFKDAVTTTS KLILPSKIVS SNENIVPQVV DY
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