Gene PHATR_46817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_46817 
Symbol 
ID7204559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp544375 
End bp545367 
Gene Length993 bp 
Protein Length194 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185723 
Protein GI219120983 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.410977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGAAGCTACT GCTTGGGATG TCGATCGTCC AGAGCATATT TTGTTTTGCG CTACCTCTCT 
AGTTTTGACC AGTTTTAAAA GCGAGATTTG CCGAAAGGTA GATGTCCACG GCTTCTCAAT
GTGATTACCA CACGTAAAAC AAACAGGACG TTCACGGGCT CAATCTTGTA GACACTATTA
GGATCAGGCT CACTCATATT TCCGAATCGA TATACAAGTC GCCGACCGTG CTTATTGATC
TTCCTGACGA AAGCAGCCAA TATAATATGA AAACGGGATT TCGAACGAAA ACAAAAGAAA
AATGTCGACT TCGACAAGAG CCTGAGTGGC CCCCATCCTC TATTTATATT GCAGTATTCT
GAATGATTCC CCTTCTTCCA ACCTCAATCG CGATTATTCG GGAAGAAAAT GATCTGCAAT
ATTTTGGCTT CAACCGTTGT TTACTCATTC CTTCTAGTAG GCCGTCGCGC ATTTCTGCAA
ACGACTGGAA CCTCATTTAC CTCAATGGCA CTTTCGACGA AGGCTTCTGG AGATGACCGG
CAGCTGAAAA AGTACTTTCA GCTTGTTGTC GACAGTGATG GTGGGACATC TATGGTTACG
AGAACATTCC AAAATGTCGA GGAAAAAGGA TACGCAAAAA CGCCACAGCT CGTAACGCAA
TTGGACAACG CCTTCGGCGT ACCGACTGAC GTTGTCTTCA CACAACTCAT GGGAGAGAAT
CCCTGGCATC ACTGCCCTGC CCCACAGTTT GTTATTTGTC TCGCTGGTGG ATGGTACGTG
AAAACAAACG ACGGCAATAC GGTCAACCTT TTGCCGGGCG ACGTGCTTTT CCAGGACAAT
ACCGAAAATC ACCCGGCCGC AAAAGAGAAC ACGAAGAATG CGCAACACTA TTCAGGCTCT
CTTAATGGTG AACCTTGTGA TCAAATGATT GTCCAGCTGG ATTTGAGGCA CGGCCCAATT
GGAGACTCCA AGAACGCCCC ACAACCCATT TAA
 
Protein sequence
MICNILASTV VYSFLLVGRR AFLQTTGTSF TSMALSTKAS GDDRQLKKYF QLVVDSDGGT 
SMVTRTFQNV EEKGYAKTPQ LVTQLDNAFG VPTDVVFTQL MGENPWHHCP APQFVICLAG
GWYVKTNDGN TVNLLPGDVL FQDNTENHPA AKENTKNAQH YSGSLNGEPC DQMIVQLDLR
HGPIGDSKNA PQPI