Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_46817 |
Symbol | |
ID | 7204559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | + |
Start bp | 544375 |
End bp | 545367 |
Gene Length | 993 bp |
Protein Length | 194 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185723 |
Protein GI | 219120983 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.410977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGAAGCTACT GCTTGGGATG TCGATCGTCC AGAGCATATT TTGTTTTGCG CTACCTCTCT AGTTTTGACC AGTTTTAAAA GCGAGATTTG CCGAAAGGTA GATGTCCACG GCTTCTCAAT GTGATTACCA CACGTAAAAC AAACAGGACG TTCACGGGCT CAATCTTGTA GACACTATTA GGATCAGGCT CACTCATATT TCCGAATCGA TATACAAGTC GCCGACCGTG CTTATTGATC TTCCTGACGA AAGCAGCCAA TATAATATGA AAACGGGATT TCGAACGAAA ACAAAAGAAA AATGTCGACT TCGACAAGAG CCTGAGTGGC CCCCATCCTC TATTTATATT GCAGTATTCT GAATGATTCC CCTTCTTCCA ACCTCAATCG CGATTATTCG GGAAGAAAAT GATCTGCAAT ATTTTGGCTT CAACCGTTGT TTACTCATTC CTTCTAGTAG GCCGTCGCGC ATTTCTGCAA ACGACTGGAA CCTCATTTAC CTCAATGGCA CTTTCGACGA AGGCTTCTGG AGATGACCGG CAGCTGAAAA AGTACTTTCA GCTTGTTGTC GACAGTGATG GTGGGACATC TATGGTTACG AGAACATTCC AAAATGTCGA GGAAAAAGGA TACGCAAAAA CGCCACAGCT CGTAACGCAA TTGGACAACG CCTTCGGCGT ACCGACTGAC GTTGTCTTCA CACAACTCAT GGGAGAGAAT CCCTGGCATC ACTGCCCTGC CCCACAGTTT GTTATTTGTC TCGCTGGTGG ATGGTACGTG AAAACAAACG ACGGCAATAC GGTCAACCTT TTGCCGGGCG ACGTGCTTTT CCAGGACAAT ACCGAAAATC ACCCGGCCGC AAAAGAGAAC ACGAAGAATG CGCAACACTA TTCAGGCTCT CTTAATGGTG AACCTTGTGA TCAAATGATT GTCCAGCTGG ATTTGAGGCA CGGCCCAATT GGAGACTCCA AGAACGCCCC ACAACCCATT TAA
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Protein sequence | MICNILASTV VYSFLLVGRR AFLQTTGTSF TSMALSTKAS GDDRQLKKYF QLVVDSDGGT SMVTRTFQNV EEKGYAKTPQ LVTQLDNAFG VPTDVVFTQL MGENPWHHCP APQFVICLAG GWYVKTNDGN TVNLLPGDVL FQDNTENHPA AKENTKNAQH YSGSLNGEPC DQMIVQLDLR HGPIGDSKNA PQPI
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