| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_46717 |
|---|
| Symbol | |
|---|
| ID | 7204625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011679 |
|---|
| Strand | + |
|---|
| Start bp | 270753 |
|---|
| End bp | 272206 |
|---|
| Gene Length | 1454 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185673 |
|---|
| Protein GI | 219120883 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0154481 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATAT TGCTCGCCTT TGGTGGCGTC GTTATGAACA TGTACGTAGT GCTTTCCTGT
TTCTTTCAAC GGATCGCACT GATTAATCCG GTGACGGGCG AACCCATTCC AGGCAGTGAA
CGTGGGTATG GTTTTCTAGG CCGCGAGGTG GACTATGGGC TTCAACCCGA TTACCAGCAG
TGCATTTACT ACCCTGCTGA GGAGGAAGCA GAGATTTTCG ATAGCTGGGT CAAGGCCGGA
AAGGCATTTG CCTACATGGT ACGTGACAGC GTTTGATTGA ACACAGCCAA TCTATTGTAT
ACATCTGATC CTGACAGGTT TCCTGTTCGA CTTTCATTAG AGTGGCATCT TGGGATTAGT
TTGTTTCTGC GTGCTCCTAT TGTCGTGCTG CGTAGCCTTT TCGCCTAGCA TGTACGAGCG
ATGGCTCTTT TGGTTCTACA TTTTTGCATC TCTTTGCATC GCGTTCAGTT TTCTCATGTT
TGGATCCGAG TTTTGCAGCG AAAACAACTG CAAGATAGCC CAGGGTGGAG GCTGGGCGAT
TTCCACTTTT TTCTTTTGGC TGTGCTGTGC CAATACGGTC AAAAGTATGG CCCAGGCTCG
ACCCCCACGA TCGAGGAACA ACGATAATGA CGATGACGAT GATGCGAATA GTCTCTGGTA
CGATCACGAA GAAGACAAGT ATCGCAAACG CCCGGGGGAG TACTACGATG ACGATGGTGG
CGATGAGAAC GGTGACGAGG ATTCGTGGGA ATCCTACTAC GAAGAGGATG AGGAAGAGGA
AAACGTAACC ACCCGACGAA AGGCAAACAC CCGTGACGAC CAAAGCCCCG CCAGCCAACT
CCAATCACAG ATACCAACTC CCCAATCGAA CGTGGATCTC CTGGATGACG ACTTTCATCC
GGACAGTCAT GCCACGGACC ACAACAGTTA TACTGGAAGT GCGCATCTCA ACAATGATGG
CGCCTCCCTG GACCAGGGCA GTTATCCAGG AGGACCGTAC AAGGACGGTG AATCTACGGC
TCGCAACAGT CTTTACAATG GTGGCAATTC CGTTGTCGAC GCGGTCTCGA TTGGTCCAAA
CAGCGACAAC GGCGGCTCGA TTCGGGATGC TTCTTCCGTA CGTGAAGGCA ACTACCATGG
TGCTAACTCG ACGGACCGGC ATAGCGTCCA CGGGTCTGCG GAGGATTTTA ATGTCCCAGT
TGACGTAGAC CACAATGACG TCCACGGCCA AAACGACAGC CGTGTTCCCG TCGTCCATGC
CGAAAATGGC TACTTTGACG ACTCCTTCGG TAACGTGAAT GCTATCGACT CCAATCGGCC
AATCCCTCGA GTCGGTGACG TTGATGGTCC CACAATCACA TAGGGCTTTT CCCCGGCTTA
TCAACAATGG CACAGCGTAT CTACCCTAAC TGTGGTTGAA TTGTAGGACG TGCGACGGCC
GTGCATTGCG CTGC
|
|---|
| Protein sequence | MGILLAFGGV VMNMYVVLSC FFQRIALINP VTGEPIPGSE RGYGFLGREV DYGLQPDYQQ
CIYYPAEEEA EIFDSWVKAG KAFAYMSGIL GLVCFCVLLL SCCVAFSPSM YERWLFWFYI
FASLCIAFSF LMFGSEFCSE NNCKIAQGGG WAISTFFFWL CCANTVKSMA QARPPRSRNN
DNDDDDDANS LWYDHEEDKY RKRPGEYYDD DGGDENGDED SWESYYEEDE EEENVTTRRK
ANTRDDQSPA SQLQSQIPTP QSNVDLLDDD FHPDSHATDH NSYTGSAHLN NDGASLDQGS
YPGGPYKDGE STARNSLYNG GNSVVDAVSI GPNSDNGGSI RDASSVREGN YHGANSTDRH
SVHGSAEDFN VPVDVDHNDV HGQNDSRVPV VHAENGYFDD SFGNVNAIDS NRPIPRVGDV
DGPTIT
|
|---|
| |