| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_44189 |
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| Symbol | |
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| ID | 7204105 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011671 |
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| Strand | + |
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| Start bp | 1237524 |
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| End bp | 1242470 |
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| Gene Length | 4947 bp |
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| Protein Length | 1560 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002186212 |
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| Protein GI | 219113257 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTTGACCATG AGAATATACT TTACCAGCCC AAGACAGTGT TTTACATAGC CACCCTGATC
TGGTCTACAA CCGACAGGTG GATAGAATTC GCATCTAGTA TTTCAAATCG TCCATTGCTT
TTCTTCAAGC TTCACGTTGA ATTTCCTACC AGAATGCCAA CTCGTGCAAA TGAGAACCAA
TCGCTCCAAG AGCTGTTTGA CTCTGTGGTT CAACTTATTC GAGAAACGCC CACTCCGGAT
GATTCCGCTC ACCAGCTATC AACCGGCGAC AAACTGCGTC TGTACGGTCT CTACAAGCAT
ATTGAAGCGA GTGCTGCGTC TGACAATAGT GACAAAACGG CAGTCGACGA GGAAGCCGCG
CCTTCTATTT TTCGTGTGGA AGCCTACGCC AAGTACCAAG CCCTGAAGGC TTGCACGGGA
TTATCTCGGG AAGAAGCGAT GCGGGAGTAT ATTTCGTTAC TCAGCGCACA AGAAAATTCA
TTGGGTGAAA TTTGTCGGGA TTGGTGGCAT AGCTCTAACT CTGTTGCCAA TGACGGCAAA
AGTTCTTTTG CGAAAGAAGT GGAAACTCCG ATTGACCCTA TGCTAGAGGA GGATACGAAG
GCTTCGAAGC TGGCCGAATC CAAGGACGTG AAACATACTG AAATGAATAA AGCCTCGCAT
GTCGAACCAG CCGCCGTTTC AAGGCCGAAA CCATCGAAAC ACTTTTTCGG TGTGTCGCCC
TTAATTCCAC GTGGCCAATT GGATATTAAG TATCGCGATC TACTTTATGC GAGTCGCCAT
TGCGCTACAA ATATGATTCG CCGATCGACT ATGCCATGCT ATCAACACTA CGAGCGAAAA
ATAAAAAATC AGTGGATCAG GGGTATGGAA GGTGATGGTC AAAGTCCTCA AAACGTTGTA
GTTGGTCTGG CAGTGCGATC TTTGTTGGAC TTGTACCTAT TGAGTCGGTC CTTCCCAGAA
GGCTCGCAGA TAATTATTTG TCCGCCGATA AATGTTCCAG GTATGCTACG AGTGCTCAGG
CACCATCGAC TCGAAGTGGT GGGCGTGGAC TTGCCGCCGT CGGACGAAAC GACCAGAAAT
ACAACAACCA CCATATCTGT CGATATCGAG GGGATCGAAG CGGCAATTAC AGATAAGACG
GTTGCCATAC TAGTGGTTCA TCCGTTCGGA ATGGTGTCGG CGTCAAATCG TGACTTTGAG
CGGATAAAAA CACTTGCCGA TCAGCATAAG CTGGACGTCA TGGAAGACTG CGCCGAAATA
TTTACAGGTC TGGGGTCACT TTCGTACAGG GGAAGTCCTC AGGCTGATGT GGTCTTCGTC
TCCTTTGGTC TGATTAAGAC TTCCACTGCC TTGGGAGGTG GCATAGCGAT GGTGAAGAAT
ATAAAAGTAG CAGAGACCAT GAAGCGATTG CACTTTTCTG TTTACCAATA TCAAACGAAT
GCAGAGTACT TCGGAAAAGT GCTGTATGCC CTCTGTATAC GCTTCGTGAC GGATTTTCCT
TGGATGTGTG GCATGATACA TCAGCTGTGC GTAATTTTCC GATTGGACTT CGATTATTTC
GTTACCTCAC TACTGCGTGG ATTCGGACGC TCACCTATGG ATTCCAGTGG GACGAAGTTT
GATCAAGCAA TACATCAGTT TCGACGACGC CCATGCGCGG CTCTCTTAGC CTTACTTAGT
TATCGCTTGC AGGAAGCAAA CCAACATGTA CCCTCGGTAT TGCATAAAAA GGATCAATGC
CTAAAGATCA CTCGCTTGTT GAAAAGCACG ATCCCAAATG TCAACCTTCC GGCCCCAACC
CCATACTGCA CGAATAGTAA TTGGCTTTTC CCAATCGTGT CGGAGACGCC TGGGAAACAA
AGCACTCAGC TCGGAAAGCT TGGATTTGAT GCCACGCAAG GATCATCGCA GTTGTGTTGT
GTGTCTCCAA ATTGCAAGCG AGCGGAAAAG CTCATGAAGG CGTTGTTGTA TCTTCCTGTC
TGCGGTAAGA AGCTCTGTAA CCTTGAAATG AAACGGCTAG TGGATGGACT TCGCACTTTT
CCGTGCAATG GTGATGAGCC CGTACAACCA GGTTTCGGCT GTAATGTTGA TTTCTTGTTG
AAAACAAGAT TGAGTCTTAG TATGGCACTC TGCATATTTT TTGTTTTCTC CCGAGATGTT
GCCTTTCTCA TACGACAGAT TCATCTGGGG ATTGTGGCGC TGGGGATTTT CCTCGTTGTT
TGTATCGCAT CGTCGAAGCT TCTGCGATGG TTGGTCGCTG ACTACTATAT CAATTCTTCG
ACCGCAGTGG GGAAGTACAT AGACCTGTTG GGTCAACATC CAGATTACGA AAGCCATCGA
GACATTTCCA ACCATTCCAC TATTCCTGGA CTTCAAGCTG TCCGCACAAG TGTTTTCCAG
TCAAGTCCAG CTCTCAGGCT TCCACAGTGC TCTCCCTGTG AACGAAAAGT GATACTTACT
GGGGCGACTG GTTTTATTGG ATCACTTGTT CTTCGAGATT TGCTCCTTCA TCGAAAAGTG
TTGGGGATTA AGAAGGTCAT ACTCATTTGT AGATCAAAGC GTGGAATTTC GGCTCAGGCT
CGAATCGACA CATTGCTCGA AAATACAGCT GTGTACGGGT TCCTAGACAA AACTGAGAAG
AGCGACTTAG TAAAGGTTAT TGAAGGTGAC GTTACAAGAC CCAATGCTTT ACTGTGTAAA
ACTGATCTCT ACGATGTCCG CAACGACGGA AGTATATCCC ATCTGATTCA CTGTGCAGCG
TCGGTGAGCT TCACACAAAG CCTTCCTGCT GCTGCCACAG CGAATATATC CTCCCCACTA
TACTTGCAAG ACCTCGCAGC ATCTCTTGCC CATGAAAAGA CACATTTCGT GCACGTCAGT
ACTGCGTTTG TGCATGGCGG TTTGAGCGGG ACGGACGACG AGCCACTCTC GGAAAGGTTG
TTTCCCCTCG GATCTTTCGA TGCTAATGAT TTATACAGTT CAATGCAAAG TACGGAGTTC
CTCGCTTCCA AGGCTATGCG TGAGCTTCGT TTTCCCAATT CTTACACGTT TAGCAAATGT
GTTTGCGAAC ATTTACTTGT GAAAAACAGC AAGGTTCGGA CAACAATTTT CCGACCGAGC
ATTGTTGGTC CAGCATGCGA GATGCCTTTC GAAGGCTGGG CGGGAGAAAG GCCGACTACT
CTAGTTGCTG CTGCATGTCT GTACCTCTCG TACCAGTGGA ACCTTTGGAG CTTTGGCCCT
TATCGAGTAT CGTGTATTCC AGTTGATGTG GTGTCAAGAT TCTTGTTATC CAGAGCGTTT
GCCGAAGGCG GCTTTCGCGA TGTTGTAGGT GTTTACGACT CGTCAAGTGA CGAAGACTTT
GAAAAGGTTT CTTGCGCTTC CTCTGCTTTG GCCGATACTG TGTATGCAGG AGATCCAGAG
TCAAGCAATT TACCACTTTA CACGATACAC AATGCGACTT GGGATTCAGC CTCTGCACCT
AGTTCTACCT TCACTTGGCT GGACTATGCC AGCACTGTAA CTCAGGTTGG ATCTTTGTTT
GGCCATTTTG GTCGAGCAAC AGCATACATC GGCTTGATTC TCTCGACACA GGTGCTCTCT
ATACTGAACC CCTCTCTTGA GCTATATACT AGAATTCATC GGAGTATTGT CAAAGCTCCT
CTCCTTTTCG TTGAAACAGT ATTTGCATAC TTGAGAGTAG ACGCGTCAAA TATCAGGAGA
CTCCTTTCCT TTATTGATCT CCCTCTTTTG TTCTTTCCCT TTATGAATAC GAGCTTTCAC
TTCCGCAGTC GGCTTGTTGC CAAGGATTTT GATGGCCAAC GATACGCTCT CAACTGTGTC
TTGGCTGCGC ATGTGTTTCT AGCCACCACG AGTGAATGCC GTCGGTCTCA GAACCCCTCA
AAAGAAAGGA ATACCTATCC AACCTTTTTC CTTCTCGGGG GGCGTATCCA CGAACCGGTT
CTCTCGGATT CGTGGTGGGC TTTAACTCAA CCAAGGGGAT CTTTAGTCAT CAGATGCATT
GGATTCTTGG CAAAGAAGGT TCTGAGATTG TGTTTTAACG AGGTTTCCGT TGATCTTTTT
TCTTTCGCTG AAGCGATCCG AGAAGCCGAG AATACGGGAC GACCTATTCG CATTGTCCTT
ACCCCTACGC ACCGGTCGGT CTTCGACTTC ATCCTTCTTA GCTTTTTAGC CTTTTCGTTG
CCGGAGCTTC AGGTGGATAT TCCTTTCGTC GCAGCCGCGG AGGATTTTCG GCAACTTCCT
ATCATAGGAT GGTTGTGTTC TTGTGCCCGA GCTATTTTCA TTCGAAGAGG CACTGGTCAA
GTTGATCCTG ATTCAAATCA GCAGATCCAG GCAATTGGTA TTCATCGACA TGGACCGGTC
CCTGTCATGG AAGTCTTCAT TGAAGGAACT CGTAGCCGTG ATGGACGGTT TGCGAAACCA
AAGACTGGTG TTTTGAAGTG CCTTCATCAA AGTGGCATAG ATTCTTTGAT CGTACCAGTT
GCAATAAGCT ATGAAGCTAT TCCTGAACAG CATTATATGG AAAAGGAACT CGTGACAGGT
GCTTCGCTTA AGATGTCGAC GCCCGGTGCT TTGCAATGGC TGTTGGTAAG TACTCTCCAT
GTTACACTTT GAGCGTTGCG TATGTGGTTG AAAGGTTCGA CGCTTACTTC TTTTGAGCAC
AGGATGTATT CGACGGAAAG AACAGCTTTG GGAATGTCCT AGTAAGTGCT GGTGCCCCGC
TCGTCATGAA CGCTGCCGAA AAGACGAATT TCAAGGAACT GGTCTGGAGT ATTCAAGGAC
GACAACGAGA TCTTATGTAT ATCTCGCGCT ATCATGTAGA GGCGATATCC CGTCTGCTCG
ATATTGATTG CGATACAGTC GAAGGCGGTA TCAAGGCCCT GAATATGAAC TACTGGTCAA
GTCATCCTGT TGAATCTAGA CGCTTGA
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| Protein sequence | MPTRANENQS LQELFDSVVQ LIRETPTPDD SAHQLSTGDK LRLYGLYKHI EASAASDNSD
KTAVDEEAAP SIFRVEAYAK YQALKACTGL SREEAMREYI SLLSAQENSL GEICRDWWHS
SNSVANDGKS SFAKEVETPI DPMLEEDTKA SKLAESKDVK HTEMNKASHV EPAAVSRPKP
SKHFFGVSPL IPRGQLDIKY RDLLYASRHC ATNMIRRSTM PCYQHYERKI KNQWIRGMEG
DGQSPQNVVV GLAVRSLLDL YLLSRSFPEG SQIIICPPIN VPGMLRVLRH HRLEVVGVDL
PPSDETTRNT TTTISVDIEG IEAAITDKTV AILVVHPFGM VSASNRDFER IKTLADQHKL
DVMEDCAEIF TGLGSLSYRG SPQADVVFVS FGLIKTSTAL GGGIAMVKNI KVAETMKRLH
FSVYQYQTNA EYFGKVLYAL CIRFVTDFPW MCGMIHQLCV IFRLDFDYFV TSLLRGFGRS
PMDSSGTKFD QAIHQFRRRP CAALLALLSY RLQEANQHVP SVLHKKDQCL KITRLLKSTI
PNVNLPAPTP YCTNSNWLFP IVSETPGKQS TQLGKLGFDA TQGSSQLCCV SPNCKRAEKL
MKALLYLPVC GKKLCNLEMK RLVDGLRTFP CNGDEPVQPG FGCNVDFLLK TRLSLSMALC
IFFVFSRDVA FLIRQIHLGI VALGIFLVVC IASSKLLRWL VADYYINSST AVGKYIDLLG
QHPDYESHRD ISNHSTIPGL QAVRTSVFQS SPALRLPQCS PCERKVILTG ATGFIGSLVL
RDLLLHRKVL GIKKVILICR SKRGISAQAR IDTLLENTAV YGFLDKTEKS DLVKVIEGDV
TRPNALLCKT DLYDVRNDGS ISHLIHCAAS VSFTQSLPAA ATANISSPLY LQDLAASLAH
EKTHFVHVST AFVHGGLSGT DDEPLSERLF PLGSFDANDL YSSMQSTEFL ASKAMRELRF
PNSYTFSKCV CEHLLVKNSK VRTTIFRPSI VGPACEMPFE GWAGERPTTL VAAACLYLSY
QWNLWSFGPY RVSCIPVDVV SRFLLSRAFA EGGFRDVVGV YDSSSDEDFE KVSCASSALA
DTVYAGDPES SNLPLYTIHN ATWDSASAPS STFTWLDYAS TVTQVGSLFG HFGRATAYIG
LILSTQVLSI LNPSLELYTR IHRSIVKAPL LFVETVFAYL RVDASNIRRL LSFIDLPLLF
FPFMNTSFHF RSRLVAKDFD GQRYALNCVL AAHVFLATTS ECRRSQNPSK ERNTYPTFFL
LGGRIHEPVL SDSWWALTQP RGSLVIRCIG FLAKKVLRLC FNEVSVDLFS FAEAIREAEN
TGRPIRIVLT PTHRSVFDFI LLSFLAFSLP ELQVDIPFVA AAEDFRQLPI IGWLCSCARA
IFIRRGTGQV DPDSNQQIQA IGIHRHGPVP VMEVFIEGTR SRDGRFAKPK TGVLKCLHQS
GIDSLIVPVA ISYEAIPEQH YMEKELVTGA SLKMSTPGAL QWLLDVFDGK NSFGNVLVSA
GAPLVMNAAE KTNFKELVWS IQGRQRDLMY ISRYHVEAIS RLLDIDCDTV EGVILLNLDA
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