Gene PHATR_44028 details

Gene Information

• Locus tag: PHATR_44028
• ID: 7203991
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: -
• Start bp: 736635
• End bp: 738972
• Gene Length: 2338 bp
• Protein Length: 576 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002186406
• Protein GI: 219113645

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.566406
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TCGAAAATCG ATCGAAATCG ATTTTTCTGG TCTGATTGCG AAACGCTCTC GCACCTGCAC 
GATCTTCTCC GAATGTTTTT GGTTCTGACT AGAATGCGAG ATTCTCCCTC CATTTTCGTG 
CTACGGGCCG AAGCTGCCGT ATTCCACAAA AGCCTGCGCG CACTTTGGCC CGAAAACTTC 
TTTTCTGTTC CGTCGCTTCA CATCCGCTTT TTTACGGTTG CATCGAAAAT CACAAGGGGC 
TCAGTGCCGA AAATCCACAC TCCGAGGCCG GGTTTGCATC GCTTGCTATC GCTAACATTT 
CAGTTTGTAG GTGGCCATGC ATGTGATATC CGGTAACAAC GCAGATCACA TCGAAATCAG 
CGATTCTAAT CAGAACCCGT AGAAATGCTG GCATGAGGTT CTGCTTGCTC CTCTTTCTTA 
CTCTGTTGGA TAATATCGCC GGGAGCTTTA TTCAGCGCTC GCACGCAGGT TCGTTTCGCA 
CTTTGACGCT ACGGACACAT AAAAAAACTG ATACGGAAGA ACATGGCGGA CCGCAAAAGC 
TGAATATACA GCAGGAGTCA TCGTTGTTTG ATATAAGAGC GCAATGGGAG AAGACTACCT 
CAGAGTTTGA TCCAGTCGAT TTCTGGAAGC AAATTGTACG AAATGACGAG ACGATAAATG 
ACTCAGTAGT CAACCGAGAA ACAAACGAAG AGGGAAGAAT AACAGAATTT TGGGATGCGC 
TGAAACACAA TACGGATAGT TCTCATCTTG AAGACGCGTT CGGCAACGTG GACTTTCATG 
GCATCGGGCA GAATCTCATG GGACTGATTT CCGGCGGTTT TCACAGCGAT GTCACGGTGA 
ACGACATCAT CGAACGCGTT CGTGACAGTA CAAACCAAGA CGATAAAGAA GATTCTAAAA 
GATTCGATAT TATCATTGAA ATGATTCAAA ACTACAAAGG TCTGATCACA GAAGTCATGG 
CAAAATATGT GCTGGATACC GTTGATTTCA GCCGTTTCCG GCCAGCCTCA CTTTTTTACT 
ACATAGAAAA AGAAGACTCC ATCAAGACAC CGAGCTGGAA AAGGAGGCAG CACCGCTTTT 
GCCCTGAGGT CGACTTAAAT ATGGTAAAGA ATCTCAACAA CGACTTAGCG CTGGCGCGTC 
TTAGCTATGC AGATTCCTGC GATGAAATTC GTGAAGGACT ACGTCTTTTC AAGATGCCTT 
ACGAGCTGGT CTATGCAGAA GTTGAAAGCG AACCAGGAAA ACCAGGCCAC TTCATTGCTC 
TAAAACGAAA CCAGCCCTTC CGAGGCGGAG AGCTTGAAGC TATTTTGGTT GTCAGAGGGA 
CCAAGACAGT AGCCGACGTC GTTACGGATC TTTGCTGTGA TATCGTTGAG TACAACGAGG 
GAAAGGCGCA TTCCTTCATG CTTGCTAGCG GACAGTATAT TGCCGAAAAA CATACACAGC 
TATTCGCAGA TCTGTTAGCC AAATCAGGTA AGAGTAAACT GAAGCTGACT CTTGTTGGGC 
ACTCCCTGGG AGCTGGTGCT GCAGCAATAG CTGGCATGGA GCTTAACGCG CACCCTGATA 
TCAATGTAGA AGGAGTTGGG TTTGGCTGTC CTTCTCTTGT GACCCAAGAG CTGGCAGAGT 
ATACTTCTTG GTATGTTACC GTCGTCAACG ACTCCGACGT GGTCCCTCGT GCAAATCCAG 
TTACTGTTGC CAATGTTCTG CTCAACATCA CAGAATACGA TTGGGTCCCC AGCGCCAAAC 
GTGATGCCCT TCAAGTCCTG AATGAGCTTC ACCGGAGACA ACCCTTTATC TTTCAAGAAG 
GAGTTATCGA AAAGCTGCAG GAAATGCTTC AGCCTTTGAT TGAATCAGCT GATAGCGGTC 
CGAGATCTAA ATTGTGTAGT GACGGAGAGC GGATTCAACC CATTCTTGTC CCGCCAGGAA 
AATGCATTCA TTTCTACCAC GATGGCTACC GAATATCAGG CCGTTACGTT CCGAACTCTT 
TTTTTTGTGA AATCGATGTA ACTCGGCGCA TGTTTAAAGA TCACTTTTTT GATAGCGGAT 
ACGAGCAGGT CTTTCTGGAC CTCATGCGGC AGGAGAAAGG TGACCCCCAC TTTCGATTCA 
AAGTGGAACA AACCGAATAT TGATGAAATC TTTTTGATTT ACCTAAGGCC TCGTCAAGTT 
TGGCCTTCTC AAAGATACTA GCAGACCCTC TGAAGGATGG TTTTTGAGAC CGTCTACTCC 
CTAGCTTTGA CAACGGAGAC AGTCAAAAAC GGCAAGCGAC CAATGTAATT GATTCCGCCA 
CATAAGTTAA GGATATGCTA GAAGCATAGC AAAATAAAAA TATCAACGCC TCGCCTCT 

 

Protein sequence

MRFCLLLFLT LLDNIAGSFI QRSHAGSFRT LTLRTHKKTD TEEHGGPQKL NIQQESSLFD 
IRAQWEKTTS EFDPVDFWKQ IVRNDETIND SVVNRETNEE GRITEFWDAL KHNTDSSHLE 
DAFGNVDFHG IGQNLMGLIS GGFHSDVTVN DIIERVRDST NQDDKEDSKR FDIIIEMIQN 
YKGLITEVMA KYVLDTVDFS RFRPASLFYY IEKEDSIKTP SWKRRQHRFC PEVDLNMVKN 
LNNDLALARL SYADSCDEIR EGLRLFKMPY ELVYAEVESE PGKPGHFIAL KRNQPFRGGE 
LEAILVVRGT KTVADVVTDL CCDIVEYNEG KAHSFMLASG QYIAEKHTQL FADLLAKSGK 
SKLKLTLVGH SLGAGAAAIA GMELNAHPDI NVEGVGFGCP SLVTQELAEY TSWYVTVVND 
SDVVPRANPV TVANVLLNIT EYDWVPSAKR DALQVLNELH RRQPFIFQEG VIEKLQEMLQ 
PLIESADSGP RSKLCSDGER IQPILVPPGK CIHFYHDGYR ISGRYVPNSF FCEIDVTRRM 
FKDHFFDSGY EQVFLDLMRQ EKGDPHFRFK VEQTEY