Gene PHATR_43891 details

Gene Information

• Locus tag: PHATR_43891
• ID: 7204346
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: +
• Start bp: 345095
• End bp: 347823
• Gene Length: 2729 bp
• Protein Length: 760 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002186046
• Protein GI: 219112925

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.237524
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTACCTT CTGAAGTGCA AAACATTGCC CCTTTCTCCG TTCCATCCTC GGACACTTCT 
TCTGTACCCT CTAGCATACC GTCGTCGGAG CCGTCGAGTG TCGCGTCAAG AATCCCCACC 
ATCTGACTGG AAATAAAACA GACATCCCAT CATGAGGTTT CTGGGCTACG CTAGCTTTTC 
AGTTGAGGAG GTTTGCGACA ACGGCAGATC TGTTGTCCGA TCTGGAAGAG GGAGATGTGT 
CGTCTTATAG ACCTAATCTT CTGTTTTACT GGAACAACAG TGTCAGGGAA CGATCCAGAA 
CGATACCAAC GTTGGAAGCA AGAATCTCTA CGGCATTCCA CGCCAATCAC GGAGAAATGG 
GGGTGGATCG GAGCAGAGTC TCTGTTTCTG TTGAGAGAAG CCAGTGGTAG TAGATTGAAT 
GGTCGTTCTC TATTTACACT TACAGTTCAT TCGACACAAA AAAAGACGCG AAGCGTGGTA 
AGGTCCACGA CACCAGCTGG TCGCGACTCG CCGCGCGGTT CGCGCGACGA TCCTCCCCTA 
TCGTGTATCG TATGGGTGTT TGGAGTGTGG TGGATTGGAC AGCTGCTCCT TTTTCCCACG 
GCAACGAGAC GACGAGTATT GACCAGCGAC AACCCACCCC GCCGCGAGCC GAACTGGGAT 
CGTACGGGGA ATTCCCCTCG ATCGACCTTG TCCTCCGTCA CGATCTATAG CAGCTGTCCA 
GCTACTATCT ATTACAACAG TGAGTGAGCT TGTGTCACTC ACTCACTACT TAGCCTCTTA 
CAATCATGGA AGACGCCCGG GCTAGATTCT TTTCGTCGAT GGAAGGGGAA ATGGAAGTCC 
ACGAGTCGGA ACGCACCAGC GACGGTTTGG ACATTGACTT TTCCATCACC GAATCTGGTC 
GTACCGTAGC TCATATGGTG CAGCAGGACC ACAAAACGCA TCACGACGAT ATGGACTTTT 
CTATTACGAG CTCGGGACGT ACGCTGGATC ACTTCGATGC CATCCAAGGA GAGAACAACA 
CTGCGCACAC GAACGATTTC AAAAACTTTC ATCTTCCCGA AGGCTTCTCC ACACAACACG 
GTCGTCACTA TCCAGCAAGT ACTGCATCGA ACCCTACACC ACCCGCACGC TCCATTCCTA 
TTCCTCAACC ACACCAAACG TACCCACCCG CGTCACTTTT GCAACAGATT CCGTCGTCGC 
AAGCCAGTTC GCAAGGAAGT TCCGGTTCGG CGTTTTTGAG TTCCATGCTC AATCAAGGCC 
CCTTGTCGCA TACACCGCCG GTGGCGTCTA GTTACGAAGT CTCCCATTTC GGCAAGCGCG 
CTCGGTCTGG ATCCGTTTCG GGACGCTTGC GATCCGCGTC CGATTATTTG GAAGAAAAGG 
GACTGTTGGA TCGACAAACC AAGGGAATTC TGAAGGATTT GATTATTATC GGAGACGAAG 
AACTCCAAGT CGCGTTGGAC CGGTACGAAG CAGGAGACCC GTCCACACTG GAGCGAATGA 
TATCGTCCGG TGCACTGGAA GAGCGATTAC CGAAAGACTT GGACATCTTG GGTGATCTGG 
ATCTGGACTT TTTGACCGTC CATGACGATG GGCTGGATTT GACCGGGGGC GACTCAATCG 
AACCCCTGTT GCCCAGCGCC GAATCCTATC ATCAACATGC GTCGCAATCC CAGTCCCTAT 
CAGCGAACGG GGGAAGTTAC CGACATCGTC AAGCTGTTGG GCCTGGCCAA GCACCGAATC 
TTGTATCACC AGCGTACGAT GATGGTATTG GAGATTTGGA TTTTAGCGGG GAGTTCGTGG 
AACAGGCTGA ATTTGGCTTC CAACCACAAT CCTACGGGTC GTCCAAGCAA GCGTCCGTTG 
CGGCGTCACC GACGGACCAT CCCAATAACA TGATGTCGGA ATACGAACGC CGTATGCGAT 
CTAATTCCCT ATTTTCGGCT TTATTGGACC CACGCGGCGG TGGCAACAGC AGCGTCAACA 
CTGCGACTGC GGCGGTCGCT TCGAAACACG GCAGTAGCGA AACAGACCGT ACCGACGGTG 
GCCTCGATTA CGGCCAGTGG ATGGACCGAA CATTGGCGAA CAACGCGAAA GCCACCGGCA 
TTCAAATTGG GCATCGAAGG TCTTCGGCTC CCGCTTCTTC GGTGCGCAGC GGCATTTCGG 
CCAGCTTGGA GCAGGCGGAT CGAAAGAAGC AAGATAAAAA GGACCGCAAA GAGCAAAAGG 
CTCTGGAAAA ACTCGAAAAG AAGCAACGAA AAGAAGAAGA AAAGGAGAAG AAGAAGCAAC 
AGCAACAACA AGCCGTCGAA GAGGAACAGA TGGAAGAGGA GCACGTTCCC GGTTCGGGTC 
GTCCCCGGGC ACTCAGCGAT CCTAACCTCC ATACGTCGCT GGATCAGCAT GGCTTGATGA 
ATGTAACGCG CCCAGATGGC TGGGTTGGTG CATACTCGCC GGAAAGCCGA AAAGTACGCG 
TCGACCGATT TATGGAAAAA CGAAATCACC GGGTTTGGAC CAAAACTGTA AAATATGACG 
TTCGAAAAAA CTTTGCCGAC AGCCGACTTC GTGTTAAAGG TCGCTTTGTC AAGAAGGAAG 
ATGAGCTGCT CATGAGGGAA TTAATGAGCA TGACCTAGGT ACATTTAGCA ACATTTTATA 
AACAGGATAG GCAGTGTTTG GGGGAGCGGC AAGTACCAGA TGTGATATCA TTAAACGATC 
AGACGCTTTT GCTCCTTTGG AGCGCCTAA 

 

Protein sequence

MVPSEVQNIA PFSVPSSDTS SVPSSIPSSE PSMSGNDPER YQRWKQESLR HSTPITEKWG 
WIGADSFDTK KDAKRGKVHD TSWSRLAARF ARRSSPIVYR MGVWSVVDWT AAPFSHGNET 
TSIDQRQPTP PRAELGSYGE FPSIDLPLTI MEDARARFFS SMEGEMEVHE SERTSDGLDI 
DFSITESGRT VAHMVQQDHK THHDDMDFSI TSSGRTLDHF DAIQGENNTA HTNDFKNFHL 
PEGFSTQHGR HYPASTASNP TPPARSIPIP QPHQTYPPAS LLQQIPSSQA SSQGSSGSAF 
LSSMLNQGPL SHTPPVASSY EVSHFGKRAR SGSVSGRLRS ASDYLEEKGL LDRQTKGILK 
DLIIIGDEEL QVALDRYEAG DPSTLERMIS SGALEERLPK DLDILGDLDL DFLTVHDDGL 
DLTGGDSIEP LLPSAESYHQ HASQSQSLSA NGGSYRHRQA VGPGQAPNLV SPAYDDGIGD 
LDFSGEFVEQ AEFGFQPQSY GSSKQASVAA SPTDHPNNMM SEYERRMRSN SLFSALLDPR 
GGGNSSVNTA TAAVASKHGS SETDRTDGGL DYGQWMDRTL ANNAKATGIQ IGHRRSSAPA 
SSVRSGISAS LEQADRKKQD KKDRKEQKAL EKLEKKQRKE EEKEKKKQQQ QQAVEEEQME 
EEHVPGSGRP RALSDPNLHT SLDQHGLMNV TRPDGWVGAY SPESRKVRVD RFMEKRNHRV 
WTKTVKYDVR KNFADSRLRV KGRFVKKEDE LLMRELMSMT