Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_43818 |
Symbol | |
ID | 7204258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | + |
Start bp | 118958 |
End bp | 120209 |
Gene Length | 1252 bp |
Protein Length | 330 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185999 |
Protein GI | 219112831 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0305685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGAACA TCTCTCTCTG GTTCCGCATG TATGGGCTAC CGTTGACACT TCTAATTTGC TTCCTTCTGT TGGCGTTAAC GAGTGACCTG AAAGTGTTTC GTAATCTTCC CCTTCCGAAT ACCACCACTG TGGTACGCTC GGGCCTCCAA ACCAAAAGCC AGACCACGCA AAATACTCCA AATTTGGTCC AGGAGCCTTT CGATCGTTTG TCTTTTCTTA GCTGGGAGCT GCACGAGGGC TTCCCAAGGT CTCACCAGTC CGGTAGACCA CGTCTGTTGA TCGCTCAAAC GATATCCAAC TTTTATGCGC CCCTGTTGGA TGCCGGTCAG CCAGTGAACC AAGCGTACGC ACGAGTGTAT GGCCACGACT ACGTAGTTGC ACGTGGGATT TATCTTGTGA ACGAGAGAAT AAACGAAACT CAGTTGACTG CGCCGGACTC GAGAGCATCG TACAACAAGA TTGCTCTTCT GAGCTATGCC TTGCGTGAGG GCAAGTACGA CAAGCTTTTG GTACTGGATT CGGACGCCGT AATCAGCGAT TTTGATATTG ATTTTGCCAC GTTCGGATTG GACCCTGAAG TCATGTTGTT TGCGCAAGCC GTCGATCCAA GCAAGGCAGT GAACTACTGG GATATCAACA ATGGAGTGAC GCTTTGGAAT CTTCACCACG GCTTGTTTGT TCCAACTTGG TACGAATGGT ACAGTCGTTC AATGAAAAAC GTCTACCGCG GTAACAACGA TAAAGATCAA GGAATATTGC ACTCCATATT GAGACAGATG CCGAACGAAA GCCGCCCAGT CCGTCGGGTA AAGCACTTTT GCTGTTACCG GGGAGCTCTA ATTCAGCATT TTATTCGTAA GAACACTACT GATTTTATGG TGTTGGCAAA GTCCCGCTTG GAAAACTTGA AGGCTGACGC TAACTATACT CTGGAGTACT ACACCACGCT CATCAACCAA ACAATCAATC AAAGTGCACT CACTGTCGAC TAATGAATTG CAATGGGAAG CGCTTGGCAG AAAATTGACG GAGAGAAGGG TTCTTACGCT CGTTCGCCAA CGCCTTTTGT TTGTTTACGC CGCAAAGCTC CCATCATGAA TGCAAATTGG GGCCTGGCGT TGCTAATAGT AGGTGACAAT TGATAGAAAC GGATTAATTT GCAAAGATTC TACTCCGCTT TGTCCAAGGG TCACAGTGAT TCAGACGCAG GAGCGTACAC GGGTCCCGGG GCTGGCCTCC GAAGCATATC AG
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Protein sequence | MGNISLWFRM YGLPLTLLIC FLLLALTSDL KVFRNLPLPN TTTVVRSGLQ TKSQTTQNTP NLVQEPFDRL SFLSWELHEG FPRSHQSGRP RLLIAQTISN FYAPLLDAGQ PVNQAYARVY GHDYVVARGI YLVNERINET QLTAPDSRAS YNKIALLSYA LREGKYDKLL VLDSDAVISD FDIDFATFGL DPEVMLFAQA VDPSKAVNYW DINNGVTLWN LHHGLFVPTW YEWYSRSMKN VYRGNNDKDQ GILHSILRQM PNESRPVRRV KHFCCYRGAL IQHFIRKNTT DFMVLAKSRL ENLKADANYT LEYYTTLINQ TINQSALTVD
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