Gene PHATR_36881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_36881 
Symbol 
ID7204689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp586759 
End bp587685 
Gene Length927 bp 
Protein Length308 aa 
Translation table 
GC content48% 
IMG OID 
Product2-deoxy-D-gluconate 3-dehydrogenase 
Protein accessionXP_002185911 
Protein GI219121372 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.804236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAGT CGAAGCCATC TTCCAAGCAT TGTCAAGGTA ACCGGGAACA TAAGATGAGG 
AAATCTGTAC GGGCGTCTGC TGCCGCCGAT TTCAATACCA AGTCAGTCTT TCTGACTGGC
GCAACGGGGG GACTTGGAAA AGCACTAGCA CTTCAGCTTT CCGAATGTGG TGTAAGGTCC
TTAATTTTGT CAGGACGGAG TGAATTGGCG TTGGAAGGAC TTGCCAAAGA ATGTCGTCAA
GTTTCTAGCA ACCCTATATT TGAATTACAC ACAGTCGTTT GCGACTTGTC CGATCCAGAG
CAAGTAAAAA TGGCAGCAGC AAGAGTTTTG GATCTTGCAC AACCCACAGG GATTGAAGTG
CTTATAAACA ATGGAGGGGT CTCTTCACGA TCGCGGTTCG TTGATACGTT GCCCGATGTT
GATCGGAAGG TTATGCAGAT AAACTTTCTT GCAGGCGCTT ATTTTGCAAA AGCGGTGACA
CCCGCAATGA TTCAAAATGG GAGCGGTCAA ATCATTTGGA TCAGTTCTGT CCAGGGTCTA
GTCGGCATTC CGAATCGAAG TTCATATGCA GCTTCCAAAT TTGCGGTCCA AGGCTACTGC
GAAAGTATAC GAGCAGAATT GGCCTCCTCC GGAGTCTCCG TGCATACCAT TTCGCCTGGA
TATATAAGAA CAAATCTTTC CAAATCCGCT ATCACTGGAG ATGGCGGAAA TCATGGAAAG
ATGGATGAGA CCACGGCGGC TGGTGCAGAT CCATATGACG TAGCGGTCCA AGTTCTTGAG
TCCTGCTCAG CTAATCAAGC AGAATTGGTG GTTGCAGCCG GGACCTCGGC CAAGGCAGCG
ATCTGGATGA GGCTACTTTG TCCACGAATG CTTCAACGCC TCCTTGTCAA ACGGTACGAG
AAAAGCCAAA AGGAGAAAAT GGAATGA
 
Protein sequence
MTQSKPSSKH CQGNREHKMR KSVRASAAAD FNTKSVFLTG ATGGLGKALA LQLSECGVRS 
LILSGRSELA LEGLAKECRQ VSSNPIFELH TVVCDLSDPE QVKMAAARVL DLAQPTGIEV
LINNGGVSSR SRFVDTLPDV DRKVMQINFL AGAYFAKAVT PAMIQNGSGQ IIWISSVQGL
VGIPNRSSYA ASKFAVQGYC ESIRAELASS GVSVHTISPG YIRTNLSKSA ITGDGGNHGK
MDETTAAGAD PYDVAVQVLE SCSANQAELV VAAGTSAKAA IWMRLLCPRM LQRLLVKRYE
KSQKEKME