Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_36881 |
Symbol | |
ID | 7204689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | - |
Start bp | 586759 |
End bp | 587685 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | 2-deoxy-D-gluconate 3-dehydrogenase |
Protein accession | XP_002185911 |
Protein GI | 219121372 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.804236 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCAGT CGAAGCCATC TTCCAAGCAT TGTCAAGGTA ACCGGGAACA TAAGATGAGG AAATCTGTAC GGGCGTCTGC TGCCGCCGAT TTCAATACCA AGTCAGTCTT TCTGACTGGC GCAACGGGGG GACTTGGAAA AGCACTAGCA CTTCAGCTTT CCGAATGTGG TGTAAGGTCC TTAATTTTGT CAGGACGGAG TGAATTGGCG TTGGAAGGAC TTGCCAAAGA ATGTCGTCAA GTTTCTAGCA ACCCTATATT TGAATTACAC ACAGTCGTTT GCGACTTGTC CGATCCAGAG CAAGTAAAAA TGGCAGCAGC AAGAGTTTTG GATCTTGCAC AACCCACAGG GATTGAAGTG CTTATAAACA ATGGAGGGGT CTCTTCACGA TCGCGGTTCG TTGATACGTT GCCCGATGTT GATCGGAAGG TTATGCAGAT AAACTTTCTT GCAGGCGCTT ATTTTGCAAA AGCGGTGACA CCCGCAATGA TTCAAAATGG GAGCGGTCAA ATCATTTGGA TCAGTTCTGT CCAGGGTCTA GTCGGCATTC CGAATCGAAG TTCATATGCA GCTTCCAAAT TTGCGGTCCA AGGCTACTGC GAAAGTATAC GAGCAGAATT GGCCTCCTCC GGAGTCTCCG TGCATACCAT TTCGCCTGGA TATATAAGAA CAAATCTTTC CAAATCCGCT ATCACTGGAG ATGGCGGAAA TCATGGAAAG ATGGATGAGA CCACGGCGGC TGGTGCAGAT CCATATGACG TAGCGGTCCA AGTTCTTGAG TCCTGCTCAG CTAATCAAGC AGAATTGGTG GTTGCAGCCG GGACCTCGGC CAAGGCAGCG ATCTGGATGA GGCTACTTTG TCCACGAATG CTTCAACGCC TCCTTGTCAA ACGGTACGAG AAAAGCCAAA AGGAGAAAAT GGAATGA
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Protein sequence | MTQSKPSSKH CQGNREHKMR KSVRASAAAD FNTKSVFLTG ATGGLGKALA LQLSECGVRS LILSGRSELA LEGLAKECRQ VSSNPIFELH TVVCDLSDPE QVKMAAARVL DLAQPTGIEV LINNGGVSSR SRFVDTLPDV DRKVMQINFL AGAYFAKAVT PAMIQNGSGQ IIWISSVQGL VGIPNRSSYA ASKFAVQGYC ESIRAELASS GVSVHTISPG YIRTNLSKSA ITGDGGNHGK MDETTAAGAD PYDVAVQVLE SCSANQAELV VAAGTSAKAA IWMRLLCPRM LQRLLVKRYE KSQKEKME
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