Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_36842 |
Symbol | |
ID | 7204668 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | - |
Start bp | 485369 |
End bp | 487838 |
Gene Length | 2470 bp |
Protein Length | 762 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185897 |
Protein GI | 219121343 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCCAC CCCAGCAGCA CCTACAACCA CAGCTGTTGA TGCACAACGG GCCGTATGCG AGCGGATTCT ACGGACCCCC ACCTCCCGGA TACGGAAGTC CTTACAATAA CGGCCCGGCA TCGGGAATGA TACCAGGGAA TGTTTCTACG CAGCCTGGAA ACGCAAACGT CCGTCCTGGT TCGTGGCAAG GCAGCGCTAG TGAGTACGCC GCCGCCGCCC CACGCCATTA CTCCTACCAA CCGCAACAAG TGCCCCCGCC GCCGCAAGCA TACTACCGAG GACCTCTCCC TGCTACAACA AAATCCAATA TCATGCCACC GTCCGGACGT AGTCGATCCA ACAGCTACAG CGAAGACCCC GTCTCCTCGT ACCAGCCGCA CTATCAGCAG CTGCACGCCC CGCCACAAGA GACCGCTGGC GAAACGAAAC CACTCTTGCA GAAGACCGCC TCCGATCGCT CGCTCACCAA AAGAAAAACC GAAAAAGGAG GAGGACGTCG TCGGCATCGT CACCGGAAGT CACACTCTTC CTCCGCCGCC ATGCCTGCTG TTTACGGTGC ATTTTGGAAC GGGCCCGACG CAGTTGCTAA CAACAACGTC AAGTCCGCCA CTAACTCTTC GGGGTCGGCT CCGGGAAACT TTTCGCCTCG CGGTGAGCTG ATGGGCTTGT GGAACAGTCG CCCCAATCCC AAACCTGACT CGCCCCGAAT GGCCACCAAC AAGTCTTCTT TCCCGGCTTC CTACCAAGAT TTTAACCAGC CAATGTCCCG GTCACCCCAG CATTTGCCCA GTTTACCCGG CGTCATGCCG TCGCCCTTTG CGGAAAGCCG TGGCGAAGCT GTCTTTCTGG CTCAGCGCAA GAGTGGAAAA TCTGAATCTT CCCGGAAACG CCACGTGCGC CAACAGAGCG CCCAGCTCTT TGTTGAAGAT GTCAAAGGCG TCGAACAGCC TAAGGCCTGC AGGGACGTAT TCTTCCTCCT CCTCTTTGTT TTTCATCTGA TCTTTGTCTT ATTCCTGTAT CACACTTACG CGTACGCTGC CTTGCCCGAT GTGGACGATG GGGACGTGTT GGAAATAGAA CTACAGGCAG AAGACGACGT TGCCACGGAC AACGTGACGG TGTATTACAA AAACCTGGTC TATATTTCCT GTCTATGCGG AGCGTTGACT GTGGTTCTGT CAGCCGGTTT GCTGATGGTT GTGACAAATT TTGCGAGGCA GTTTGTGCAA GTATCACTCA TCGTCGTCAT CACACTCAGC TTTGTTTGGG GTACGGTCGG GATTGGACTG AGCCCAAAGA ATGTGGTGCC GATTACTGGA GTCATCGCTT TGGCCCTGAG CGTAGCGTAT ACCTTTATCG TATGGGATCG CATTCCCTTT GCAGCCGTAA ATCTTTTGAC AGCATCCTCT GGAGTCCGAG CCTTTCCTTC CATGATTATA TTGGCCTTTT GTGTGCAAGC GCTGGCTCTG GCCTACAGCA TCTTCTTTGC GATCACGGCC TTTGGCATCT ACGACTCCAT TAATGACGGA CGAATTCATG CTTCGGAACG AATGGCCGTT ATTATATACG CTTTAATTGG CGTATCATTC TACTGGACCT ACCAAGTGCT GCTGGTAGGT AAACCGAGGT TGCACCCTAC ACGAATATGT ATCTTTCGCA TTTTTTTGAA TTTATCTCAC ACAGCGATGT TCGTCGACTT AGAATACCGT CCAAGTGGCG ACCTCACGTA TTATTGGTAA CTGGTGGTAT CAACCCGATG GCCAGGCAGT GGTCAAGCAT TCAACTTTTG AAACCATCTT TTATTCTATG GGTTCCATTT GCTTCGGCAG TCTCGTTGTC GGCCCAGTCA TTTTGATACG GCAGTTGTCA GTACTCTTTC GTCCCAACTC TGATGAAGCG TCTTTGCTGT GTCTGCATGA ATGCCTGCAC TGTGTTCAGA CTTGCATGAC CTCGTGTGTT GATTCTCTCA CTGAGAGTAT CAATCCCTGG GCATTCACTT ACATCGGTTT ATACGGCTAC GGTTTTGTTG ATTCTGGTCA GCAAGCCACC AAGCTTTTTC AGAAGCGTGG CTGGACAACG ATCGTATCAG ACGACCTGAT TCCGAATGTT TTGGTGATGA CTAGCCTGGT CATTGGAGGC GTCACAGGAT GCTTTGGGTA TCTTATTTCC GGAATGCATA GTTTGCACGT TTTGTCTATC GACCAGCCGG AAATTGTATC GTTTGCCACA GGCTTTGCAA TCGGTCTGGC CATGACGAGT GTTCTCTTGG GTATTATTGG AAGTTCTGTT AACGCTGTCC TGGTCTGTTT TGCATCTAGT CCATTGGACT TTGAAAGGAA CCACCCGGAA CTAAGCCATG AAATGCGATC GGCCTGGCGT GAAGTGTGGC CCGGAGCGCT GGATATGGTG GACTTGCGCA TCAATCTAGG CATGTTGAGC TCTTCCGGCG CGCACGTCCC AGCCGTGTAG
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Protein sequence | MYPPQQHLQP QLLMHNGPYA SGFYGPPPPG YGSPYNNGPA SGMIPGNVST QPGNANVRPG SWQGSASEYA AAAPRHYSYQ PQQVPPPPQA YYRGPLPATT KSNIMPPSGR SRSNSYSEDP VSSYQPHYQQ LHAPPQETAG ETKPLLQKTA SDRSLTKRKT EKGGGRRRHR HRKSHSSSAA MPAVYGAFWN GPDAVANNNV KSATNSSGSA PGNFSPRGEL MGLWNSRPNP KPDSPRMATN KSSFPASYQD FNQPMSRSPQ HLPSLPGVMP SPFAESRGEA VFLAQRKSGK SESSRKRHVR QQSAQLFVED VKGVEQPKAC RDVFFLLLFV FHLIFVLFLY HTYAYAALPD VDDGDVLEIE LQAEDDVATD NVTVYYKNLV YISCLCGALT VVLSAGLLMV VTNFARQFVQ VSLIVVITLS FVWGTVGIGL SPKNVVPITG VIALALSVAY TFIVWDRIPF AAVNLLTASS GVRAFPSMII LAFCVQALAL AYSIFFAITA FGIYDSINDG RIHASERMAV IIYALIGVSF YWTYQVLLNT VQVATSRIIG NWWYQPDGQA VVKHSTFETI FYSMGSICFG SLVVGPTCMT SCVDSLTESI NPWAFTYIGL YGYGFVDSGQ QATKLFQKRG WTTIVSDDLI PNVLVMTSLV IGGVTGCFGY LISGMHSLHV LSIDQPEIVS FATGFAIGLA MTSVLLGIIG SSVNAVLVCF ASSPLDFERN HPELSHEMRS AWREVWPGAL DMVDLRINLG MLSSSGAHVP AV
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