Gene PHATR_36721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_36721 
Symbol 
ID7204610 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp222001 
End bp223295 
Gene Length1295 bp 
Protein Length323 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185658 
Protein GI219120853 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGCTC CCAAAAAGCC GGAGGACCCT CAGGAAGCAG CCAAGAACCA AGCGATTGAT 
AAAGAGTTAG AGCGTGCCAA ACAACAAGAA GACCTAAAGG TCAAGCTGTT ATTATTGGGT
GCCGGAGAAT CCGGAAAGTC TACAATTTTT AAACAAATGC GAATTTTGCA TGGGGCTCCG
CGAACCGAGG ATGATTTACG CATGTACGGA GTTGTGGTTC GTTCGAATAT TGTCACCGCT
ATGCGGAAGC TGTGTGAACA CCTGCGGGGG TTAGGAATGA TAGATCAGTT AGCGGCAGAG
GACCCGCTCG CGGATGAAGA CGGGACCGGA ATGAGACCCA TCGACGCGTT CAATCTCGTT
GTTGCACATT TGGTAGACAA CACTGCGTCA CCGGATAGTT TGGATCCGCC ATACGCCAAC
GGTACTGATT GGGTTGGACA GAGCCCAAGA GCAGGATTGG GACCGAACAA CGATGCAAAG
AAATTTTTGC AGCTGTGGAG ACCGATCAAA GTTCTTTGGC AGGTGAGTCG TGTGTAGTGT
CGTGAGGTCG CGTTGTGTAG ACCTGCTCTC TTTTTATATA ACAACACACA CCTAATTGTT
TCGCTTAGTC TAAAACCATG AAAGAAGTAT GGTCTAGGAG AGCAGCAATG AACGTAATTG
ACGGACACAA AGAATATCTA CAAGACCTGC CACGAATTGC GTCCCCGGAC TTTCAACCGA
CTCAGCAAGA CATTCTCCTT GCTCGAGTGA AAACGAACCA AGTTGTAATG GAACGGTACC
GGATCGATGG CATTGAGTTT GAGATGTACG ACGTTGGGGG GCAGCGCTCC GAACGGCGCA
AATGGATCAG TTGCTTTGAA AACGTGGACG CCGTTATTTT TGTGGCCGCG CTATCAGAAT
ATGATCAAGC TCTTGCGGAA TCCAAACGTA CAAATCGCAT GAGCGAAGCA TTAGAACTAT
TCCGTTCCGT ATGCAACAAC AGGGCGTTTG CAAACACATC GATTATGCTC TTTTTAAACA
AGAAAGACGT ATTTGCGGAA AAAATCCACT ACAGTGACAT AGTCTCTCAA ACGCCATTCT
CTGACTATCC CTACCCACCG AGAGAGTTTA ATAGCGGTGT CCTATACTTC ATCGAAAAGT
TCAAAGAATG CCTCATTGAC GATGACTTCA ATGACTCGTT TATCCATGTT ACTTGCGCAA
CTGATACAAA TAACATGGAA TTCGTCTTGG ACTCGACACG GACAATTATC ATGACCGACA
ACCTTCGAAG GTCAGGCTTT CTGGGCCCAG GCTAA
 
Protein sequence
MPAPKKPEDP QEAAKNQAID KELERAKQQE DLKVKLLLLG AGESGKSTIF KQMRILHGAP 
RTEDDLRMYG VVVRSNIVTA MRKLSLWRPI KVLWQSKTMK EVWSRRAAMN VIDGHKEYLQ
DLPRIASPDF QPTQQDILLA RVKTNQVVME RYRIDGIEFE MYDVGGQRSE RRKWISCFEN
VDAVIFVAAL SEYDQALAES KRTNRMSEAL ELFRSVCNNR AFANTSIMLF LNKKDVFAEK
IHYSDIVSQT PFSDYPYPPR EFNSGVLYFI EKFKECLIDD DFNDSFIHVT CATDTNNMEF
VLDSTRTIIM TDNLRRSGFL GPG