Gene PHATR_3639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_3639 
Symbol 
ID7204481 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp65497 
End bp66659 
Gene Length1163 bp 
Protein Length347 aa 
Translation table 
GC content54% 
IMG OID 
Productmyo-inositol 2-dehydrogenase putative 
Protein accessionXP_002185618 
Protein GI219120773 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTGG AAGCGGTCGA CACGAAAGAG ATCATCAAAG TTGGTGTGAT TGGTATGGGA 
CGTATTGGTC TCGTTCATTT GGAAGCCATT ACCAAGGCTC CCGGTGTTAC CCCCGTTATC
GTTTCGAATC CTACCGTTTC CAAGGCCGAG GCAGGTACGA CGAACTTCAA CGACACTCGG
CATTCGTAGT CGTCACGCCG AGACGAAAGA ATCGTGCGCA CTCTACTCTA ACACAAACAT
TCCTTACGGT CATGTATTGC TTTTTCTTTC CCGCAGCCGC CAAGCAGTAC AACATCCCCC
GCTTCACGGA AGACGCCATG GAAGTCATCA CGGACCCCGA GGTGGACGCC GTTTGGATCT
GCTCCCCCAG TCAGTTCCAC GCTGAACAGA TCAAGGCCTG TGCCGCCAAC GGCAAGCACG
TCTTTTGTGA GAAACCGATT GCCACTGATC TGCCCGAAAC CGTCGAGGCC ATCAACGCCT
GTAACGAAGC TGGCGTCAAG CTCATGATTG GACTGCAGCG TCGATTCGAT CAGAACTTTA
AGCGTGTACA GGAAGCCGTC ACCCAAAAAG AAGTCGGTGA ACCCATCATG ATTAAACTTT
GCTCGCGGGA TCCTTCTCCT CCACCGGCGT CCTACGTTAA GGGCGGTGGT GGTATCTTTG
CCGACATGGC CGTACACGAT CTCGACATGA GTCGTTTCTT GGCCGGGTCC GATCCTATTG
ACATTCTTGC CATTGGATCT TGCCACATTG ACAAGACCAT TGCGGATTTC GAAGGCTCCG
AAAAGTTCGA TACCGCCAGT TGCCTCGTCC GCTACCCCAA TGGGGTCCAG GCCATGATTG
ACGTCTGTCG TCAGAGCTCC TTCGGGTACG ATCAACGGGC CGAAGTACTC GGTACCGAGG
GGATGATTCA AACCGACAAC GTCTACCCCA ACACGGCCAA GATTTACAAA TCCCATTTCA
CCGGAAACGC CGACATGCCC TACGATTTCT TTCTCTCGCG TTACAACGAA GCTTACGTTA
CGGAAACTGT TGCCTTTTGC GACTCCCTCG TCAACGACAC ACCCGTACCG TGCACTGGTG
AAGACGGTCT CGTCGCTCTC ATCATGGCCA TTGCGGCCGA CAAGTCCGCG GCGGAAAACC
GATGGGTCAC CTTTCGCGAA ATC
 
Protein sequence
MNVEAVDTKE IIKVGVIGMG RIGLVHLEAI TKAPGVTPVI VSNPTVSKAE AAAKQYNIPR 
FTEDAMEVIT DPEVDAVWIC SPSQFHAEQI KACAANGKHV FCEKPIATDL PETVEAINAC
NEAGVKLMIG LQRRFDQNFK RVQEAVTQKE VGEPIMIKLC SRDPSPPPAS YVKGGGGIFA
DMAVHDLDMS RFLAGSDPID ILAIGSCHID KTIADFEGSE KFDTASCLVR YPNGVQAMID
VCRQSSFGYD QRAEVLGTEG MIQTDNVYPN TAKIYKSHFT GNADMPYDFF LSRYNEAYVT
ETVAFCDSLV NDTPVPCTGE DGLVALIMAI AADKSAAENR WVTFREI