Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_3578 |
Symbol | |
ID | 7204588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | + |
Start bp | 132784 |
End bp | 133662 |
Gene Length | 879 bp |
Protein Length | 293 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185636 |
Protein GI | 219120809 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00298023 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTTTTGCTGG CCTACGTTGG CACTAACTAC GGCGGGTTTC AAATCAATGA TGGCCAGCGT ACACCCCAAG CAGAATTCGA GCTTGCTATG CTTCGAACTC GGCTTCTTCT GCCCTGCAAC TTTGGAAGTC CGCACAAATA CAGCTGGAGT ACATCTGGGC GAACGGACAA GGGTGTTCAC GCTTGCGCGC AAGTTGTATC GGCCAAGGTT GAACTCTTGC CAGATCAGAC AATGGCAGAA GTGCGAGACG AAATGAACAC CGTGCTACCG GATGATGTTC GTGTCTTGGA TGTCGTCCGC ACTACGCGCA ACTTCTGCGC CAAAACCCAA CGTGACCGTG TCCGCTATCA GTATATGATC CCTTCATTTG TCTTTGCCGA TGCCGACACG CTTCGAGTTC TTTTCAAGGA CGTAGTAGGG CATTCTAACA GAGGGCAAAG CAAAGCCGAG CTACTGCTCC CTGAAGAATT AAAATCAATA CAGTCTGCAT TGAAAGATTT TAGGGCAAAT CCTATGCATA TTGCAAAGCT GCAAGAGGCG CTTCAAGTCT ACGAAGGCAC ACATGCCTTT CACAACTTTT CCCGTGGTGT TAAAGCAAAC GAGGCCCGTG CGGCTCGTTA CATCGAGAGG TTTCACGTAG AAGAACCCAT TGTCTTTCCG AACGGAGTGG AATGGATTCC AACACAAGTC CTCGGCCAAT CTTTTCTCCT AAACCAAATC CGCAAAATGG TGTGTATGGC AATGGATGTG GCGCGAGGCG TGGTCCCATT GACCAATGTA TCACGAGCAC TTGAGCGACA GTCCGACGTT CGAATCAATG TGGCACCGGC GCAAGGATTA TTTTTAGAAA TGAGCTATTA CGGAGGCTAT AACCGACGT
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Protein sequence | FLLAYVGTNY GGFQINDGQR TPQAEFELAM LRTRLLLPCN FGSPHKYSWS TSGRTDKGVH ACAQVVSAKV ELLPDQTMAE VRDEMNTVLP DDVRVLDVVR TTRNFCAKTQ RDRVRYQYMI PSFVFADADT LRVLFKDVVG HSNRGQSKAE LLLPEELKSI QSALKDFRAN PMHIAKLQEA LQVYEGTHAF HNFSRGVKAN EARAARYIER FHVEEPIVFP NGVEWIPTQV LGQSFLLNQI RKMVCMAMDV ARGVVPLTNV SRALERQSDV RINVAPAQGL FLEMSYYGGY NRR
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