Gene PHATR_33356 details

Gene Information

• Locus tag: PHATR_33356
• Symbol: Trx-y
• ID: 7203980
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: -
• Start bp: 685660
• End bp: 686303
• Gene Length: 644 bp
• Protein Length: 178 aa
• GC content: 50%
• Product: thioredoxin y
• Protein accession: XP_002186397
• Protein GI: 219113627

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.00024318
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGTCTT TAATGGCAGC GTTCCTTTGC TTCATGACAG CGGCAGAAGC GTTTGTACAT 
TGTAAGCAGA ATAGCCGAAC TCTTGGTCTA CGCAGTGTTG CATTCTTTCG ATCGGAGGGG 
GTACTGTGGA TGGGAGAAGG GACCGAAGAA AAAGCCGCAC CGCTGGTAAC GGGGGAGCAG 
CTGGAAATAA TGCTGCAGGA GTGGGATACG CCGTTAGTTG TGGACGCGTA TGCGACTTGG 
TACGTGACAC AGCACAATCT TCGCTCAACG TATGTTTCTC TCAATCTTAC GCTGTTTCGA 
AGTCGCTTAC ACCATCTGCA TTTTTCTTCT TCGGTTGAAC AAACAGGTGC GGACCCTGTC 
TACTGATGGC CCCGGAATTT GAAGCGGCGG CTTCCGAATT GAAGGGAAAA GTGCGATTTG 
TTAAGCTAGA TACGGACAAG GAGGAGGCCA TGGCCGCCAG GTTGAACATT ATGGGTTTGC 
CGACTCTATT GTTCCTCGAC AAGTACGCTC CAAAAGAGGG CGAAGAAAAT GTAGGAGCAC 
GGGCTGTGCT CAAAGGACGC ATTGAAGGAG CGCTACGAAA GCAAAACATT CTAGATTTGG 
TTGAACATCA CTTTTTTGAA GGACCGGCAC CCAAAATGAT GTAG 

 

Protein sequence

MRSLMAAFLC FMTAAEAFVH CKQNSRTLGL RSVAFFRSEG VLWMGEGTEE KAAPLVTGEQ 
LEIMLQEWDT PLVVDAYATW CGPCLLMAPE FEAAASELKG KVRFVKLDTD KEEAMAARLN 
IMGLPTLLFL DKYAPKEGEE NVGARAVLKG RIEGALRKQN ILDLVEHHFF EGPAPKMM