Gene PHATR_33106 details

Gene Information

• Locus tag: PHATR_33106
• ID: 7204245
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: -
• Start bp: 58421
• End bp: 60394
• Gene Length: 1974 bp
• Protein Length: 657 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002186270
• Protein GI: 219113373

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTTCC TCCCGGCGTG CGCTCGTATT CTCCTCCTCA TATGGCTAAC GGGCACAGTA 
ATGTCGGTAC AATCGTGGCT TGGATCGTCA GCTCAAGAAA GTACCGACTC GATTGTGTGT 
CGAATCACAC TTTCCGCTAC ACTGCTTGCC CTTCCCACCA TCGGCAAGCC AGCTGTGTCT 
ACGAATACGG TCGCGTGTAT TCCTATTGTT GACAACCGAG AAACCGCCGA TCTCTTTTCC 
ATAGATCTTC CACTGCACTT CTGGGAACAA CACGCGGTCG CTGCTGCCAA CGGCACTTTG 
TTGGTATCCA TCGAGGGTGC CTCGATTACC CGGAAAGGCA TCGTGGCAAC GGCCCAAGCT 
ACCTTTCAGG TCTTGCCCGA GCTTCCCAAT AGTTCACGAC ACTTGTCGTT GGATGATGAC 
CCCAACCATT ATTGGACGAC GGGAATCAAA ACTATAGCTG TAGTTCGAAT ATCCACGCGC 
GATGCCGAGC CCACCTACTC GACCGCTGAT ATGGAATGGG GGATCTTCGG GGATGGTCTG 
GAGAACGATG GGGTTACCAT GCCCACACAA TACAATGCCT GTTCTTTTGG AAAACTCAGA 
TTCATCCGGA GTGTTTACGG CGTTGTGGAT TTGAAACTTG ACCGAACGCT TGGAAGCTTC 
GAGTCGGTGG ACTCGATTTT TCAGTCCGCG CAAAAGCAGC TCGTGGAAGA ACACAATTTG 
GACAGTATCA CAGACCTGGG AGACAAAATT CTCTTTTGTC TCCCTCCCGG AACCGGATCT 
TGGATAGCTG TTGCCGGTGT TCGTCACTGG CGAGCCTTGT TCAACGATCA ATGGTGCCTC 
AGCCTGAGCG CTCTCATGCA CGAGGTTGGG CACACTGTGG GGTTGATGCA TTCCAACGAA 
GCTGGTCAAA TCTATGGGGA TCAAACGGGG TACATGGGAT TTGGACGATT AGCCGTCAAC 
ACGCCCCGCC AATGCTTCAA CGGTCACAAG AACGACGTGC TAGGATGGTA CAAAGACCGA 
GTCGTAGCGG TGGATCCGAA AGAGGATGGA GGCGGGGCCA GATTGTACAA AATCGCCGCT 
TTTGTCGACT ACGACAAGGC TGCATCCAAC GAGCCGGTGA TCCTAGATGT TGGAGGACAA 
ATCTTTTTAC AATATAACCG TGCCAAGGGT TTCAATGTCG GTACCGAAGA GAAGGGAAAC 
ACCTTGACAA TCACCGAGTA CGATGGTACC GACAGTTCCA CAAACCTAGG GGGCCTCAAG 
GTCGGTGAAG AATTCGGCGA ATACAACTTT CAACACTCGG GGCATGTGTT GATGATTCAG 
GTTTGCGAAA CGATAATTGG AGACAGCAAT TCTCCCGATG CTATGATTGT GAGTGTGGGC 
CTCGATCAAT CTCTCTGCCG AAACGCTCAA ATGGCCTCGC CTCAGGCCGA CATACAAGGC 
ATGCCTTTTC CACTCACAGC TTCCCCCACA GTCTCGCCAA CGGTGGCGAC CAACTATCCG 
ACGATGACTC CCACTCTTAG CCCTACCTCT CCACCCGTGT TGAATCCTAC CCGCCGCCCT 
ACAACCAGTC CGACGCACTC ATCTATGTTT ACAGAAACCT CACATTCGAC CAACAGTCCA 
ACTTTTCGAC CAAGCGAGGA TACTGCTGAA GCCATTCGCA GCATTGAAGG TCTTCCCTTT 
ACGAGAACAC CAACATTGGC GCCTTCTGCG CTACCTGTTG CAGCTCCCGG TCTTCCGTTC 
TCCGACGATG AACAAGCAGA ACCGAATGAG GCGATCACTG CACCACCCTC CCAGCGTCGT 
CCACTACGAA ACTACGCGCC TCGCGTAGAG TCCTTTCCGA GTGCGGCGAT CACCCAGCCG 
CCCTCCCAGC GTCGTCCATT GCGAAACTAC GCACCTCGTG TAGAGTCCTT GCCTTTAAAA 
AAGGAAAAGA CTACAGAGTC GCGCATGCAC GATCGTTTGA GACTTTCTGA CTAG 

 

Protein sequence

MKFLPACARI LLLIWLTGTV MSVQSWLGSS AQESTDSIVC RITLSATLLA LPTIGKPAVS 
TNTVACIPIV DNRETADLFS IDLPLHFWEQ HAVAAANGTL LVSIEGASIT RKGIVATAQA 
TFQVLPELPN SSRHLSLDDD PNHYWTTGIK TIAVVRISTR DAEPTYSTAD MEWGIFGDGL 
ENDGVTMPTQ YNACSFGKLR FIRSVYGVVD LKLDRTLGSF ESVDSIFQSA QKQLVEEHNL 
DSITDLGDKI LFCLPPGTGS WIAVAGVRHW RALFNDQWCL SLSALMHEVG HTVGLMHSNE 
AGQIYGDQTG YMGFGRLAVN TPRQCFNGHK NDVLGWYKDR VVAVDPKEDG GGARLYKIAA 
FVDYDKAASN EPVILDVGGQ IFLQYNRAKG FNVGTEEKGN TLTITEYDGT DSSTNLGGLK 
VGEEFGEYNF QHSGHVLMIQ VCETIIGDSN SPDAMIVSVG LDQSLCRNAQ MASPQADIQG 
MPFPLTASPT VSPTVATNYP TMTPTLSPTS PPVLNPTRRP TTSPTHSSMF TETSHSTNSP 
TFRPSEDTAE AIRSIEGLPF TRTPTLAPSA LPVAAPGLPF SDDEQAEPNE AITAPPSQRR 
PLRNYAPRVE SFPSAAITQP PSQRRPLRNY APRVESLPLK KEKTTESRMH DRLRLSD