Gene PHATR_25714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_25714 
Symbol 
ID7204200 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp627022 
End bp627914 
Gene Length893 bp 
Protein Length205 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186096 
Protein GI219113025 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.329815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CATCTTTCTT CGACTAGTCC TGCACTGCAA GACTCGCATT CGGTTGAGGT AAAGAAGACA 
AATCACCATG GGAGCGTACA AGTACATGGA AGAGCTGTGG CGCCACAAGC AGTCCGATGC
CCTCCGATTT TTGCTGCGAG TTCGTGCTTG GGAATACCGC CAACGCCCCA ACATTTTGAC
GTGCAACCGT CCCGCCCGAA CCGAGAAGGC CCATCGGCTT GGCTACAAGG CCAAGCAGGG
ATACGTGATT GTCCGTGCCG GTGTCCGGCG TGGAGGCCGC AAGCGCCAAA ATCATCGCGG
TATGGTGTTC GGAAAGCCCA AGTAGGTAGA CATTGGCCCA TTCATTGCTT TGCTTTCAAT
CAGTATTCCT GACATTCTCC ATCTCGTTTC TGTCTCTTAG GCACCAGGGT ATTAACCAGC
TGAAGTTTGA GCGTAACTTG CAGAATGTGG CCGAAGAAAA GGTTGGACGC CGTTATGCCA
ACTTGCGCGT TTTGAATTCT TATTGGGTGA ATCAAGACGC AACCATGAAG TACTACGAAG
TCATTCTCGT CGATCCGAAT CACCCCAAAA TCCGTAATGA TCCCAGGGCT AACTGGATTG
TCAATCCCGT ACACAAGCAC CGCGAAATGC GTGGTCTCAC TTCGGCTGGA CGCAAGGGTC
GTGGTCTCCG CAAGAAGGGA CACCGCGCCA ATGGCATCAA AGGAGGATCA TACCGTGCTG
CCTGGCTCCG TCGCAACACA ATGCGCCTCA AGCGTTACCG TTAAGCTGCC GGCTCCCAAG
ACAAACTATC CAATGCTCCG GGTACTCTCT GTCTACTAGG TTGCTTCTTT ATGAAAATAT
CTATGCTTTT CCTATTGGGC ATAGTTTAAA TTATTTTTAT CTGCTTCTTT GTG
 
Protein sequence
MGAYKYMEEL WRHKQSDALR FLLRVRAWEY RQRPNILTCN RPARTEKAHR LGYKAKQGYV 
IVRAGVRRGG RKRQNHRGMV FGKPKHQGIN QLKFERNLQN VAEEKVGRRY ANLRVLNSYW
VNQDATMKYY EVILVDPNHP KIRNDPRANW IVNPVHKHRE MRGLTSAGRK GRGLRKKGHR
ANGIKGGSYR AAWLRRNTMR LKRYR