Gene PHATR_18585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_18585 
Symbol 
ID7204199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp626268 
End bp626826 
Gene Length559 bp 
Protein Length152 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186386 
Protein GI219113605 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.206689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CATCAGCTCC CTCGCTGCGA CTCCCCTATA CTTGATTAGA AATTGTTTTA AACCATGGTT 
CATGTTCCGG ATCAACTCGT TTGGGAGCTT ATCAAGAAGC AATCTTGCTT TCTCAAGAAG
AAGAATGGAA ACACAAAGCG TAGTGGATCT ATTTCGTTCA GTGTTGAAAA GGGCAACTTG
AAGTCTCTGA ACCTTTTGAA GTACAACGGA TTGGCGAACA GTAAGACCAT CGATGTTGTC
TGTACTAGTG AGAACCGAGC ACAACTCGTC ACAAAGAGTG CGTCCAAGGC CGACAATTCT
CCGTCCAAGA CTTTTGCTAC CAACAATATC AACAAGGACT TTCGTCGGGC GGAGAACGTT
ATCTTGAAAC AAACAACGGA TGTCTACTAC CGACGTGACC TTAAGGCCGC TGCCCTCGGA
AAGTACACCA AGGTGTATCA GGCGAACCGA CGTGCCAAGG GAATATCTAA GCCAGTTCCA
TGCAAGAAAG GACGGGGTAC CTTGTCGGAT TAAATTCGCT GAACCATCTC TCTAGAAATA
TTCTTGATCG TTTATTGCG
 
Protein sequence
MVHVPDQLVW ELIKKQSCFL KKKNGNTKRS GSISFSVEKG NLKSLNLLKY NGLANSKTID 
VVCTSENRAQ LVTKSASKAD NSPSKTFATN NINKDFRRAE NVILKQTTDV YYRRDLKAAA
LGKYTKVYQA NRRAKGISKP VPCKKGRGTL SD