Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_13265 |
Symbol | CHLH |
ID | 7204596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | - |
Start bp | 162586 |
End bp | 166617 |
Gene Length | 4032 bp |
Protein Length | 1343 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | protoporphyrin IX magnesium chelatase, subunit H |
Protein accession | XP_002185833 |
Protein GI | 219121210 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTGGTG GTATGTTTAC CAGGAGCAAT TCGGAATCTC GTCGGGTCGT TCCGGAAGAC CCTCGTGGAA GACCCACCAT GAAGGTCGTT TATGTGGTGC TCGAATCGCA GTACCAATCT TCCATGACGG CTGCCGTCAA GCGAATCAAC GCGGGATCGG ACAATATGGC CGTCGAATGT GTTGGTTACT TGCTAGAGGA ACTCCGCAAC GAAGACGCCT TTGAGCAGTT CAAAAAGGAT GTGGCCGACG CCAATATTTT CATCGGCTCC CTCATTTTTG TGCAGGAGCT CGCCGAAAAG GTCGTCGAGG TAGTAGAACC CCAACGGGAA CGTCTCGATG CCTGTCTCGT TTTCCCTTCC ATGCCGGAAG TCATGCGTCT TAATAAGGTG GGAACCTTCA CTATGAAAAA CTTGGGACAG TCCAAGAGTG TCGTGGCTGA TTTCATGAAG AAGAAGAAGC AGGAAGATGG TTCCAGTTTT GAGGAAGGAA TGTTGAAGCT CCTGCGTACC CTTCCCAAGG TTTTGAAATT TCTTCCCAGT GACAAGGCCG CGGACGCGCG TACCTTTATG ATGAGTTTCC AGTACTGGCT CGGGGGATCC CCAGAAAATC TCGAATCTCT CCTGATCCAA ATCGGACAGG ATTACGTCGC CCCCATCCAA GAATCTATGA AGGGAAAAGA CAAGGTCAAA GCGGAGGACC CCGTCTTGCT ACCTGACAAG GCCATTTGGC ACCCGGTTGC TCCCGATATT GTGTTTGAAA ACAATCAAAA GTACTTTGAA TGGTACAACA ACGAATTCTG CCCCGACGCC GGTATCGACC CCAAAACGGC CCCAACGATT GGTATTATCC TCCAAAAGTC CCACATTAAC ACCAAGGACG ACACACACTA CGTTTCGCTC ATTTCCGAGC TCGAAAGCCG TGGCGCCCGT GTCGTTTCCA TCTATTCGGG AGGTTTGGAT TTTTCCGGAC CTGTCGAGGA ATACTTTTAT GATTCCAATG GCAAGCCGAT TGTGGACACT GTCATTAACT TGACTGGGTT CGCCCTCGTC GGAGGACCGG CTTCGCAGGA TCACGCCAAG GCTTCACAGG TTCTCAAAAA GTTGAATCGT CCGTACATGT GCGCTGTGCC CCTAGTCTTC CAGTCGTTCG AGGAATGGCA GTCATCCGAA CTCGGACTCC ATCCGATTCA GGTTGCTCTG CAAGTGTCTT TGCCCGAAAT TGATGGAGCT ATCGAACCCA TTATTTTCGC TGGTCGCGAA GGTGCTACGG GACGTAGTGT TCCGCTCGCC GATCGTGTCA ACCTTTTGGC CGATCGGTCT CTGAAGTGGG CCAACCTCCG CTCCAAGCCA AAGTCTGAAA AGAAGATTGC CATAACCATC TTCTCCTTTC CTCCGGACAA GGGCAATGTT GGAACTGCCG CCTACCTGGA TGTTTTTGAT TCCATCAAGG CTGTTTTGGG ACAGCTCAAA TCGGAAGGAT ACGACGTAGG TGACGCTCCC ATGAACAAGG AAGCCATCAT GGCTTCCGTC CTGGACGATC CCGAAGCAAA AATTTCTTCA CCCGAGCTCA ATGTTGCGTA CCGCATGAGC ACCGAAGAAT ATTACGAGTT GACCCCGTAC GCGACGGATT TGGAGGAAAA CTGGGGACCG GCACCTGGTA ACCTCAACTC GGACGGTCAA AACCTGGTAG TGTACGGAAA GCAGTTTGGC AACGTCTTTA TCGGTGTCCA GCCTTCCTTT GGATATGAGG GCGACCCGAT GCGATTGCTT TTCGCCAAAT CCGCGAGCCC CCATCACGGC TTCGCCGCAT ACTATACGTA CTTGGAGAAA ATCTTCCAAG CCGACGCTGT TTTGCATTTC GGAACGCACG GATCTTTGGA ATTCATGCCA GGCAAGCAGG TAGGTATGTC CGGCACCTGC TACCCCGATC GTCTGATTAA CTCGCTGCCA TCCGCCTACT TGTACGCTGC CAACAACCCG TCAGAAGCCA CGATTGCCAA ACGTCGCTCG TACTCTGCTA CAGTCTCGTA CCTGACGCCG CCGGCGGAGA ACGCCGGTCT CTACAAGGGA CTGAAGGAAC TAAAAGAGCT CATCGCCTCT TTCCAGGGTC TACGCGGAAA CGAAGGACGC GGCGCCGCTA TTGTCAACTC TATTGTCTCA ACCGCCTGGA CCTGCAACTT GGATAAGGAC ATTGATCTTC CCAGTCTCGA AACGTACGAT GCCGCCAAGG ACACTGCCGA AAACCGTGAC AGTATTGTGG GACAAGTTTA TTCTCAGATT ATGCAGATCG AAAGCCGTCT CCTCCCTTGT GGCCTGCACA CTGTTGGGGT GCCACCGACC GCTGAAGAAG CCATCGCGAC CTTGGTTAAC ATTGGTCAGC TCGATCGACC GGAAGACAAA ATTGAAGGAC TTCCTCGGGT GATTGCCTCA TCGGTTGGTC GTGAGATCAA CGAAGTCTAC CGTGGGAACA ACCAAGGTGT CCTAACGGAT GTCGAGCTAA ACGAGAAGAT CGTTATGGCT TCCCGTGCTG CTGTCCGCGC CTTGGTTATG CAATCAACCG GCTCTGACGG ACGTGTCAAG GAAGTCAAAT CCGCCTTTGA CGAAATGAGT GCCATGTTTG GAAAGATGAT GGGTCAGAAA AAGCCCTGGA CAAAAGCAAT TATTGATGCC GGTTTCCCCG ATGTGAACGA GGCTCGCCTT GACCCTGTTA TCACATATCT TGAGTTCTGC CTCAAGCAAG TTGTGGCAAA CAATGAACTC GGAGGAATAA TGGAGCTTTT GAACGGAGAG TTTTTGATGC CCGCCCCTGG TGGCGACCCT ATCCGCAACC CTGCAGTCCT ACCTACTGGA CGCAATATGC ATGCACTTGA TCCATCCTCT ATTCCCACAG CAGCTGCTGT AGAAGTTTCG CAGGACGTTG TTCGAAAACT TCTCGAAAAG CTTCGGGACG AGAACGATGG TGCCTTCCCC GAAAGTATTG CCTTTACTTT GTGGGGTACC GACAACATCA AGACCTATGG GGAATCGCTC GCGCAGGTGC TCGCTCTAGT CGGTGTCCGC CCGGTTGCTG ATTCTCTTGG ACGCGTCAAC AAGGTCGAAC TTATTCCTTT GGAAGTCCTT GGACGTCCCC GTATCGACGT TGTCGTTTCA TGCTCCGGTG TCTTCCGTGA TCTTTTCATC AACCAAATGA ATTTGATGGA TCGTGGAATC AAAATGGCTG CCGAAGCTGA TGAACCTTTA GAAATGAACT TTGTCCGGAA ACACGCGATG GAGCAAGCCG AAGAACTCGG AGTCTCACTC CGTGACGCCG CCGCTCGCGT CTTCTCGAAC TCTGCCGGAT CATACAGTGC TAACGTAGGC CTCGCCATTG AGAATGGTGG ATGGGAAGAT GAAGGCCAGC TTCAGGAGCA GTTCTTGACG CGCAAGGGCT TTGCGTTTAA CGCCGATAAG CCTGGTATGA TGGAACAGCA GGCTGCTCTT TTCAAGAGCG CTTTGAAGAC TGTTGACGTT ACCTTTCAAA ACTTGGACTC GTCTGAAATT TCGATTACCG ATGTTTCGCA CTACTACGAT TCTGATCCTA CTAAGGTTGT CCAAGGTCTC CGTGACGATA AAAAGAAACC CATGTCGCTT ATGGCTGATA CCACCACCGC CAACGCTCAA GTCCGTACAT TGTCCGAAAC CGTTCGACTC GACGCCCGTA CTAAGCTATT GAATCCGAAA TTCTACGAAG GTATGCTTTC GACAGGATAT GAAGGTGTCC GTGAAATCCA GAAGCGTCTC CGCAATACTA TGGGATGGTC CGCGACCGCC GGCGAAGTCG ATAACTTTGT ATTTGAGGAC GCCAACAGCG TGTTTATTGA GGATGCCGAG ATGCAAAAGC GTCTTCTCGA CACGAATCCC AACGCTTTCA GAGATATGGT GACCACATTC TTGGAAGCGA ATGGTCGCGG ATACTGGGAC ACGTCGGATG AGAATATTGA GCGTCTTCAG GAGCTGTATG CGGAGGTGGA AGACCGCATC GAAGGTGTAT AA
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Protein sequence | MGGGMFTRSN SESRRVVPED PRGRPTMKVV YVVLESQYQS SMTAAVKRIN AGSDNMAVEC VGYLLEELRN EDAFEQFKKD VADANIFIGS LIFVQELAEK VVEVVEPQRE RLDACLVFPS MPEVMRLNKV GTFTMKNLGQ SKSVVADFMK KKKQEDGSSF EEGMLKLLRT LPKVLKFLPS DKAADARTFM MSFQYWLGGS PENLESLLIQ IGQDYVAPIQ ESMKGKDKVK AEDPVLLPDK AIWHPVAPDI VFENNQKYFE WYNNEFCPDA GIDPKTAPTI GIILQKSHIN TKDDTHYVSL ISELESRGAR VVSIYSGGLD FSGPVEEYFY DSNGKPIVDT VINLTGFALV GGPASQDHAK ASQVLKKLNR PYMCAVPLVF QSFEEWQSSE LGLHPIQVAL QVSLPEIDGA IEPIIFAGRE GATGRSVPLA DRVNLLADRS LKWANLRSKP KSEKKIAITI FSFPPDKGNV GTAAYLDVFD SIKAVLGQLK SEGYDVGDAP MNKEAIMASV LDDPEAKISS PELNVAYRMS TEEYYELTPY ATDLEENWGP APGNLNSDGQ NLVVYGKQFG NVFIGVQPSF GYEGDPMRLL FAKSASPHHG FAAYYTYLEK IFQADAVLHF GTHGSLEFMP GKQVGMSGTC YPDRLINSLP SAYLYAANNP SEATIAKRRS YSATVSYLTP PAENAGLYKG LKELKELIAS FQGLRGNEGR GAAIVNSIVS TAWTCNLDKD IDLPSLETYD AAKDTAENRD SIVGQVYSQI MQIESRLLPC GLHTVGVPPT AEEAIATLVN IGQLDRPEDK IEGLPRVIAS SVGREINEVY RGNNQGVLTD VELNEKIVMA SRAAVRALVM QSTGSDGRVK EVKSAFDEMS AMFGKMMGQK KPWTKAIIDA GFPDVNEARL DPVITYLEFC LKQVVANNEL GGIMELLNGE FLMPAPGGDP IRNPAVLPTG RNMHALDPSS IPTAAAVEVS QDVVRKLLEK LRDENDGAFP ESIAFTLWGT DNIKTYGESL AQVLALVGVR PVADSLGRVN KVELIPLEVL GRPRIDVVVS CSGVFRDLFI NQMNLMDRGI KMAAEADEPL EMNFVRKHAM EQAEELGVSL RDAAARVFSN SAGSYSANVG LAIENGGWED EGQLQEQFLT RKGFAFNADK PGMMEQQAAL FKSALKTVDV TFQNLDSSEI SITDVSHYYD SDPTKVVQGL RDDKKKPMSL MADTTTANAQ VRTLSETVRL DARTKLLNPK FYEGMLSTGY EGVREIQKRL RNTMGWSATA GEVDNFVFED ANSVFIEDAE MQKRLLDTNP NAFRDMVTTF LEANGRGYWD TSDENIERLQ ELYAEVEDRI EGV
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