Gene PHATR_10655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_10655 
Symbol 
ID7204039 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp1000197 
End bp1000968 
Gene Length772 bp 
Protein Length230 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186443 
Protein GI219113719 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.451617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTGA CTTTGAAAGT CTTGTCCTGC GCACCTAGGG CCTTCGAAAT CGAAAACTTC 
CTATCTCGAC AGGAAGTTGA GCATATTGTG CAACTTGCTT CGGGTGTTGA TCTCAAACTC
TCGTCTACCG GTGACATAAC TGGTCACAAG GAAACACCCA AAGAATTACA GACAGACTCC
CGACGCACAC GAACTTCCTA TAACTCTTGG GTACCGCGCG AAAAGTCACC GATCATCGAC
GCAATTTACC GGCGGGCTGC CGACGTCATG CGCATTGATG AAGCTCTCCT CCGTCATCGT
AGCGACCATA CCGAATGGAC CAACTTGACT TCTACCAAGC CTTTGGCAGA ACAGCTACAA
CTGGTTCACT ATGGACCCGG CCAAGAGTAC ACGGCCCATC ATGACTTCGG CTTCTCGCGC
ATCGATGATC AGTTTCAAGG GGCCCGCTTT GGAACTTTAC TTTTGTACTT GAATGAGGGC
ATGACAGGAG GAGAAACGAG CTTTCCACGA TGGTCGAATG CAGAAACATT TCATGAACTA
TCCATCAAAC CCGAAGTCGG CAAAGCGGTC TTGTTTTACA GCCAACTTCC TGACGGTAAT
CTTGATGATG TAAGTCAGTA AATGAAAAGA CTGCAGCGTG TCCTCTGTTC GCTTTGTTCT
CACTGTTTTC GTTATCCACT CCTTCCAGCT CTCCCACCAT GCGGCGAAAC CTGTCACGGA
TGGAGAAAAA TGGTTGATCA ACTTGTGGAC ATGGGACCCC ATTTACGATT GA
 
Protein sequence
MNLTLKVLSC APRAFEIENF LSRQEVEHIV QLASGVDLKL SSTGDITGHK ETPKELQTDS 
RRTRTSYNSW VPREKSPIID AIYRRAADVM RIDEALLRHR SDHTEWTNLT STKPLAEQLQ
LVHYGPGQEY TAHHDFGFSR IDDQFQGARF GTLLLYLNEG MTGGETSFPR WSNAETFHEL
SIKPEVGKAV LFYSQLPDGN LDDLSHHAAK PVTDGEKWLI NLWTWDPIYD