Gene PHATR_10617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_10617 
Symbol 
ID7204328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp252745 
End bp253431 
Gene Length687 bp 
Protein Length229 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186307 
Protein GI219113447 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.290577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCCAG AAAAGTACGG CCCCGTATGG AATCTCCGAG ACAAGCGTTG TGGTGCACTC 
GGCATCAAGG TGGGTATGAT GCCCCTCTTT GACGATTGGG GCGTCCGCCA TCCCTGTACG
ATTCTGTTTT TGGACAACAA TGTCGTTTTG GGCCAAAAAA GTATAGAACA ACACGGATAC
TGGGCTGTGC AGATTGCCGC TGGGCAGCGC AAACGAAAGA ACGTGGGCGT TTCCGTGCTC
GGACAGTACA AGCACATTCT GGAGGACGAG AACGAGAATC CTCCCTACCT GGTTCGTGAA
TTCCGTGTGT CGGATGGTGC CCACTTGGTA CCGGTGGGGG CGAGAATTCA CGCCCGTCAC
TTTGTGCCCG GTCAGAACGT GGACGTTTCC GGAATTTCCA AAGGAAAGGG CTTTCAAGGT
GCCATGAAGC GACACAATTT CGGAGGAATG CCCGCCTCGC ACGGTGTTTC CAAATCGCAC
CGAGCTCTGG GTTCCACTGG ACAGTGCCAA GATCCTGGGA AAGTCTTCAA AGGGAAAAAG
ATGGCGGGTC GCATGGGAAC CGAGCGAGTC ACGGTGCAGA ATCTGCGAGT CGTCAAGGTG
GATCGCGGAC GAAATTTGCT CTTTTTGGAA GGTGCTGTGC CCGGCAATAA AGGCGCCTTT
GTGGAAATAC GAGACGCCGT CAAAAAG
 
Protein sequence
MYPEKYGPVW NLRDKRCGAL GIKVGMMPLF DDWGVRHPCT ILFLDNNVVL GQKSIEQHGY 
WAVQIAAGQR KRKNVGVSVL GQYKHILEDE NENPPYLVRE FRVSDGAHLV PVGARIHARH
FVPGQNVDVS GISKGKGFQG AMKRHNFGGM PASHGVSKSH RALGSTGQCQ DPGKVFKGKK
MAGRMGTERV TVQNLRVVKV DRGRNLLFLE GAVPGNKGAF VEIRDAVKK