Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_10617 |
Symbol | |
ID | 7204328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | - |
Start bp | 252745 |
End bp | 253431 |
Gene Length | 687 bp |
Protein Length | 229 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186307 |
Protein GI | 219113447 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.290577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCCAG AAAAGTACGG CCCCGTATGG AATCTCCGAG ACAAGCGTTG TGGTGCACTC GGCATCAAGG TGGGTATGAT GCCCCTCTTT GACGATTGGG GCGTCCGCCA TCCCTGTACG ATTCTGTTTT TGGACAACAA TGTCGTTTTG GGCCAAAAAA GTATAGAACA ACACGGATAC TGGGCTGTGC AGATTGCCGC TGGGCAGCGC AAACGAAAGA ACGTGGGCGT TTCCGTGCTC GGACAGTACA AGCACATTCT GGAGGACGAG AACGAGAATC CTCCCTACCT GGTTCGTGAA TTCCGTGTGT CGGATGGTGC CCACTTGGTA CCGGTGGGGG CGAGAATTCA CGCCCGTCAC TTTGTGCCCG GTCAGAACGT GGACGTTTCC GGAATTTCCA AAGGAAAGGG CTTTCAAGGT GCCATGAAGC GACACAATTT CGGAGGAATG CCCGCCTCGC ACGGTGTTTC CAAATCGCAC CGAGCTCTGG GTTCCACTGG ACAGTGCCAA GATCCTGGGA AAGTCTTCAA AGGGAAAAAG ATGGCGGGTC GCATGGGAAC CGAGCGAGTC ACGGTGCAGA ATCTGCGAGT CGTCAAGGTG GATCGCGGAC GAAATTTGCT CTTTTTGGAA GGTGCTGTGC CCGGCAATAA AGGCGCCTTT GTGGAAATAC GAGACGCCGT CAAAAAG
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Protein sequence | MYPEKYGPVW NLRDKRCGAL GIKVGMMPLF DDWGVRHPCT ILFLDNNVVL GQKSIEQHGY WAVQIAAGQR KRKNVGVSVL GQYKHILEDE NENPPYLVRE FRVSDGAHLV PVGARIHARH FVPGQNVDVS GISKGKGFQG AMKRHNFGGM PASHGVSKSH RALGSTGQCQ DPGKVFKGKK MAGRMGTERV TVQNLRVVKV DRGRNLLFLE GAVPGNKGAF VEIRDAVKK
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