Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_10585 |
Symbol | |
ID | 7203933 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | + |
Start bp | 1338800 |
End bp | 1340140 |
Gene Length | 1341 bp |
Protein Length | 337 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186234 |
Protein GI | 219113301 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ACCGTCAGAC TGTTCAGTCG CCATTTGCTG GACAACTCGG AGCAATTTCC CGACGTAGCA GAATACTTGC TGCAAGCACG TAGTGATTCG GTGCACTCCT TTATTCTTGA TTCCGAAATA GTTGGTGTTT ACATGGACGC AACGAAAGGA AAATTTCGAA TGCTTCCTTT TCAAGATCTG TCTACTCGGC GAGGAAGTCA AAGCGTTGAA AGAGATAGAG TTCAAGTTCG CATCTACGCC TTTGATTTGT TGTACCTCAA TGGAGAATCA CTTTTAAAGG TTCCTTTTTG GAAGCGAAGA AAGCTTTTAC AAGAGGTATT CAAAGAGACA CTTGGATTCG CTCACGCGCA ATCGGTTGGA CTTGCCACTT TCGATGACGA ACTCTTGAGA GCTACTCTGG AACAAGCGGT CACGGATGGT GCTGAAGGCC TCATGATTAA ACTCACAGGT GAAGGCTATC ACGCACCGAA CGCTGACGTA TCCTGTCGCA CCTTTGGCTA CGAATCGGGG ACACGCAGTC AGCTCTGGCT GAAGTTGAAG AGAGACTATG TTGTGGGCTA TGCCGATACA ATCGATGTCG TACCGATAGG AGCTTGGTAC GGGAACGGTC GGAAAGCACA GAAGGGATTC CTAAGTCCAA TACTCTTTGC CGTGTACGAT GAAGACGAAG GAGCCTTCCG CTCCATCTCC CGGTGTATGA GCTTTACAGA CGCCATGTAT CAAGGTAAGG ACTTGCTGCC AAGAAATGAG ATGCCTGAAC GTTTGTACTT GTCTACTCAT TTGCTTTGAC CCAGTAGCCA TTAAAAATTT TTATTTCCAT GGTAAGCCAT ATCCAGAAAA AGTAGGTTCT GGAGATCCAA AAGTTGATGC AGCGACTGTC GTGCAAGAAT CAAATGCAAG CCACGTGGTT GCCTCTGACG ATGAATCCTT GGAGGACATG GAAGACCAGA CTGCTGAGGT AGCTGATGGA CTCTTGGAAG GACGTGTCAA CTGCTACACC ACTACTCCAC CGTCAACTTA TATCATTACA AATGAGACGC CTAGTATTTG GTTCAAACCG ATGGAAGTTT TTGAAGTTTC TTTTGCGGAC CTTTCACTTA GTCAGGCCCA TACAGCAGGG GCAGGTCTTC TAGATGACCC TCAAGGACGA GGGGTCGCAA TGGTACGTTC TGGATTGTTT TTGTTGCAAT TTGAAAGGAT CGGAACAGCC TCATATATCA CATGTCCTTG CAGAGATTCC CTCGTTTTAA ACGCCGTCGG CCAGATAAAT CAGTTGAACA AGCCACAACA ACTGTTCAAA TTGCACAGCT TTTTGGCCAG CAGTCAAAAA TGAAGAGGTA G
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Protein sequence | TVRLFSRHLL DNSEQFPDVA EYLLQARSDS VHSFILDSEI VGVYMDATKG KFRMLPFQDL STRRGSQSVE RDRVQVRIYA FDLLYLNGES LLKVPFWKRR KLLQEVFKET LGFAHAQSVG LATFDDELLR ATLEQAVTDG AEGLMIKLTG EGYHAPNADV SCRTFGYESG TRSQLWLKLK RDYVVGYADT IDVVPIGAWY GNGRKAQKGF LSPILFAVYD EDEGAFRSIS RCMSFTDAMY QGRVNCYTTT PPSTYIITNE TPSIWFKPME VFEVSFADLS LSQAHTAGAG LLDDPQGRGV AMRFPRFKRR RPDKSVEQAT TTVQIAQLFG QQSKMKR
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