Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_10581 |
Symbol | |
ID | 7204023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | - |
Start bp | 905718 |
End bp | 907319 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186434 |
Protein GI | 219113701 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTCGTTAAAG TTGGGGTGGT CAAAGAAATC GAAAAAGGAG AATGCAAGGT CGCCATTGTC CCTGATGGTG CCAAACGCCT TCTCAAACAA GGCGTTATGG TATGCGTTGA ACGCGGCGCT GGGAACAGAG GAGACTTCTC TGACTCAGAC TACGAAAAAG TTGGCGCAAC CGTTTTGAAC CAGGCCGAAG AAGTCTATGC CGCGGCGGAC GTCATAGTCA AAATCCGCGA ACCTATCATG AACACAGATA CGGGTAAACA CGAAATCGAT ATGGTTGGAA AAGGCAAAAC ACTGATTTCT TTCGTGGGGC CTCGAACGGA CCAAGGGAAA TTGCTCATGG ACAAGGCCAA AGCTGCTGGT GTTAATTTGC TCGCCGTCGA TGCAATCCCG CGTATTTCAC GTGCTCAGAG TTTGGATGTA CTGAGCTCAC AAGCCAAAAT TGCTGGATAC CGTGCCGTAA TTCAGGCTGC GAATCACTAC CAACGATTCC TGAACGGCGA GGTGACCTCG GCTGGAAGCT TTGAAGCAGC TAAGGTGCTC GTAGTAGGCG CTGGGGTTGC GGGACTTGCA GCCATCAGCA CGGCATCCAG TATGGGGGCA ATCGTGAAAG CCTTCGATAC CCGTTTGGAA ACCAAAGAGC AAGTCGAATC ACTTGGTGGG GAGTTTCTGA TGCTCAGTTT TAGTAGCGGC GACGGTGGCG ACTCTGCGGG GTACGCCAAG GTAATGAGCG AGGACTTCTA CCAAAAAGAG ATGGAAATGT TTTTCAAACA GGCTAAGGAA TGTGATGTTA TCATTACGAC CGCAGCGATT CCGGGACGGA AGGCTCCCGT TTTGATTAAG CAGGATGCTG TCGATCAGAT GAAACCTGGA AGCGTCGTTA TTGATTTGGC CGGATCAAGC GGTGGAAATT GTGAGCTGAC CAAAAAAGAC GAGATTTACG TACACAAAGG CGTCACGATA ATTGGTAGCG ATATGACTAA CCAAGCCATG GCTTGGCAAG CTTCCACGAT GTACAGCAAC AATATTGTCA ACTTGTTTGG CATTTTATGC AAGGAAAAGA GGTTCAACAT TGATATGAAG GATACCGTTA TCCGTGGAAT GACGACCGTT TTAGATGAAG AAGTAACTTT TCCGCCTCCT GATAGCATTA CTAAGACGAA TGCCGGCAAC GGCACCAAAA ATGACCCAAT TCCTCAGCTT CGAAATGAAA CACCAAAGGA ACCTTCTATC TGGTCGAAGC GTGTGTTTGA TTTGGCACCT CTTGGAGAAT TTGTCGGACT GGTTGTTATC GGCGCCTTTT TCGGCATTGT TGCAGCATAC GCACCTGTGG TCTTCACGCA GCAGTTGGGA TATTTTATAC TTGCAGGATT TCTCGGATAT TACCTGATCT GGAACGTTGA ACCAGCTCTT TTCAGCCCTC TGATGAGCAC CAGCAACGCT TTGTCTGGTG TCGTAATTCT GGGTGGAATT CTTATGGTCA GTACCGAAAC CGGCAGCCCT ACGAGCGTCC TCGGTTGTGT GGCCACCGGT GTGGCAGCTA TTAATGTCTT TGGTGGGTTT GCTGTTTCCT ACCGAATGCT CTTGATGTTC AAGAAAGAAT AG
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Protein sequence | FVKVGVVKEI EKGECKVAIV PDGAKRLLKQ GVMVCVERGA GNRGDFSDSD YEKVGATVLN QAEEVYAAAD VIVKIREPIM NTDTGKHEID MVGKGKTLIS FVGPRTDQGK LLMDKAKAAG VNLLAVDAIP RISRAQSLDV LSSQAKIAGY RAVIQAANHY QRFLNGEVTS AGSFEAAKVL VVGAGVAGLA AISTASSMGA IVKAFDTRLE TKEQVESLGG EFLMLSFSSG DGGDSAGYAK VMSEDFYQKE MEMFFKQAKE CDVIITTAAI PGRKAPVLIK QDAVDQMKPG SVVIDLAGSS GGNCELTKKD EIYVHKGVTI IGSDMTNQAM AWQASTMYSN NIVNLFGILC KEKRFNIDMK DTVIRGMTTV LDEEVTFPPP DSITKTNAGN GTKNDPIPQL RNETPKEPSI WSKRVFDLAP LGEFVGLVVI GAFFGIVAAY APVVFTQQLG YFILAGFLGY YLIWNVEPAL FSPLMSTSNA LSGVVILGGI LMVSTETGSP TSVLGCVATG VAAINVFGGF AVSYRMLLMF KKE
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