Gene PHATR_10581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_10581 
Symbol 
ID7204023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp905718 
End bp907319 
Gene Length1602 bp 
Protein Length533 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186434 
Protein GI219113701 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTCGTTAAAG TTGGGGTGGT CAAAGAAATC GAAAAAGGAG AATGCAAGGT CGCCATTGTC 
CCTGATGGTG CCAAACGCCT TCTCAAACAA GGCGTTATGG TATGCGTTGA ACGCGGCGCT
GGGAACAGAG GAGACTTCTC TGACTCAGAC TACGAAAAAG TTGGCGCAAC CGTTTTGAAC
CAGGCCGAAG AAGTCTATGC CGCGGCGGAC GTCATAGTCA AAATCCGCGA ACCTATCATG
AACACAGATA CGGGTAAACA CGAAATCGAT ATGGTTGGAA AAGGCAAAAC ACTGATTTCT
TTCGTGGGGC CTCGAACGGA CCAAGGGAAA TTGCTCATGG ACAAGGCCAA AGCTGCTGGT
GTTAATTTGC TCGCCGTCGA TGCAATCCCG CGTATTTCAC GTGCTCAGAG TTTGGATGTA
CTGAGCTCAC AAGCCAAAAT TGCTGGATAC CGTGCCGTAA TTCAGGCTGC GAATCACTAC
CAACGATTCC TGAACGGCGA GGTGACCTCG GCTGGAAGCT TTGAAGCAGC TAAGGTGCTC
GTAGTAGGCG CTGGGGTTGC GGGACTTGCA GCCATCAGCA CGGCATCCAG TATGGGGGCA
ATCGTGAAAG CCTTCGATAC CCGTTTGGAA ACCAAAGAGC AAGTCGAATC ACTTGGTGGG
GAGTTTCTGA TGCTCAGTTT TAGTAGCGGC GACGGTGGCG ACTCTGCGGG GTACGCCAAG
GTAATGAGCG AGGACTTCTA CCAAAAAGAG ATGGAAATGT TTTTCAAACA GGCTAAGGAA
TGTGATGTTA TCATTACGAC CGCAGCGATT CCGGGACGGA AGGCTCCCGT TTTGATTAAG
CAGGATGCTG TCGATCAGAT GAAACCTGGA AGCGTCGTTA TTGATTTGGC CGGATCAAGC
GGTGGAAATT GTGAGCTGAC CAAAAAAGAC GAGATTTACG TACACAAAGG CGTCACGATA
ATTGGTAGCG ATATGACTAA CCAAGCCATG GCTTGGCAAG CTTCCACGAT GTACAGCAAC
AATATTGTCA ACTTGTTTGG CATTTTATGC AAGGAAAAGA GGTTCAACAT TGATATGAAG
GATACCGTTA TCCGTGGAAT GACGACCGTT TTAGATGAAG AAGTAACTTT TCCGCCTCCT
GATAGCATTA CTAAGACGAA TGCCGGCAAC GGCACCAAAA ATGACCCAAT TCCTCAGCTT
CGAAATGAAA CACCAAAGGA ACCTTCTATC TGGTCGAAGC GTGTGTTTGA TTTGGCACCT
CTTGGAGAAT TTGTCGGACT GGTTGTTATC GGCGCCTTTT TCGGCATTGT TGCAGCATAC
GCACCTGTGG TCTTCACGCA GCAGTTGGGA TATTTTATAC TTGCAGGATT TCTCGGATAT
TACCTGATCT GGAACGTTGA ACCAGCTCTT TTCAGCCCTC TGATGAGCAC CAGCAACGCT
TTGTCTGGTG TCGTAATTCT GGGTGGAATT CTTATGGTCA GTACCGAAAC CGGCAGCCCT
ACGAGCGTCC TCGGTTGTGT GGCCACCGGT GTGGCAGCTA TTAATGTCTT TGGTGGGTTT
GCTGTTTCCT ACCGAATGCT CTTGATGTTC AAGAAAGAAT AG
 
Protein sequence
FVKVGVVKEI EKGECKVAIV PDGAKRLLKQ GVMVCVERGA GNRGDFSDSD YEKVGATVLN 
QAEEVYAAAD VIVKIREPIM NTDTGKHEID MVGKGKTLIS FVGPRTDQGK LLMDKAKAAG
VNLLAVDAIP RISRAQSLDV LSSQAKIAGY RAVIQAANHY QRFLNGEVTS AGSFEAAKVL
VVGAGVAGLA AISTASSMGA IVKAFDTRLE TKEQVESLGG EFLMLSFSSG DGGDSAGYAK
VMSEDFYQKE MEMFFKQAKE CDVIITTAAI PGRKAPVLIK QDAVDQMKPG SVVIDLAGSS
GGNCELTKKD EIYVHKGVTI IGSDMTNQAM AWQASTMYSN NIVNLFGILC KEKRFNIDMK
DTVIRGMTTV LDEEVTFPPP DSITKTNAGN GTKNDPIPQL RNETPKEPSI WSKRVFDLAP
LGEFVGLVVI GAFFGIVAAY APVVFTQQLG YFILAGFLGY YLIWNVEPAL FSPLMSTSNA
LSGVVILGGI LMVSTETGSP TSVLGCVATG VAAINVFGGF AVSYRMLLMF KKE