Gene PHATR_10398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_10398 
Symbol 
ID7204134 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand- 
Start bp1373457 
End bp1374181 
Gene Length725 bp 
Protein Length209 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186518 
Protein GI219113869 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.296577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCCAA TCACAATAGG TATTGCAGGA GGCACGGGTG CGGGAAAAAC CACTCTGGCA 
AGAAAGCTCT TCGAGGCTCT GGGCGGCGAA GAGAACGTAA ATTACCTCAT TCATGATTCT 
TATTACAAAT GCCTGAAACA CAAATCGATC GAAGAGCGGG CCAAGACAAA TTTTGATCAT 
CCAGAAGCAT TGGACACGGA CCTCCTCATT GAACACGTAC GGTGTCTAAA GCAAGGGGTG 
ACCTGTGATG TCCCGACCTA TGATTTTACC ACGCATTCTC GAACCGACGA AACCAAACCC 
ATGGTTACCC GAAAAATCAT TCTGATCGAA GGCATTTTGT TATTTTGCCA CCCGGTCTTA 
GCCAAAGAAA TGGACGTTAA AGTGTTTGTG GTATGTGCCA CGACAATTCG GAGCATCCCT 
CTGGTTTCCG TTGACGTTTA CAGTTATCTA ACCTTTTGTT TACTCTGTTC TACCTGTTGT 
CATAGGATGC CGACGCTGAC ATTCGTTTAG CAAGACGCTT GCAACGAGAT ACCAAAGAGC 
GCGGACGCAC ATTTGAGGAA GTCATTGCTC AGTACCAAAA GACGGTACGA CCGATGCACG 
AAGAGTGGGT GGAGCCGTCG AAAAAGGTAG CGGACTTGAT TGTGCATTCA AACGGTCATT 
CGATGGTAGT AGCAGTCGAC ATGTTGACCA ATCATTTAAG ATGCAAGGCT AACATTTCAG 
CATGA
 
Protein sequence
MIPITIGIAG GTGAGKTTLA RKLFEALGGE ENVNYLIHDS YYKCLKHKSI EERAKTNFDH 
PEALDTDLLI EHVRCLKQGV TCDVPTYDFT THSRTDETKP MVTRKIILIE GILLFCHPVL 
AKEMDVKVFV DADADIRLAR RLQRDTKERG RTFEEVIAQY QKTVRPMHEE WVEPSKKVAD 
LIVHSNGHSM VVAVDMLTNH LRCKANISA