| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_10239 |
|---|
| Symbol | |
|---|
| ID | 7204243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011671 |
|---|
| Strand | - |
|---|
| Start bp | 894063 |
|---|
| End bp | 895262 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002186430 |
|---|
| Protein GI | 219113693 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CCGGTTACTA TTCTTTCCGG TTTTCTTGGA AGTGGGAAAA CTACATTGAT TCAGTATATA
CTGAAGTCCC CAGACCACGG AAAGCGAATC GCCGTGATTG AGAACGAGTT CGGGGAAGGC
CTGGCCGTAG AATCCATGAT TGCCCGTGAC GGAGTGGACA ATGGGTCTCT CATAGATCTG
ATTGAGCTTC CAAATGGCTG CATCTGTTGC ACGGTCAAGG ACTCACTCGT TAGCACGCTG
GAACTTCTGT TACAAAGACG CCGCGACCTC GATTATATTT TGATTGAATG TAGTGGCATG
GCTAATCCAG GTCCAATTGC GAGTCTGTTC TGGCTGGACG AGGGTTTGTC TCGTTTGCGC
CTGGACGGTA TTGTGACTCT CGTTGACGCA GCGCATCTCG AACGCCAACT TGGGGCGACA
AAGGAAGCTG CCCAGCAAAT TGCGTATGCG GATCGTATTC TTTTGAACAA GGTTGACTTA
GTGGATGAGG CATCGGCCTT GCGACTCCTC AATTTGATCC GAACGATCCA TCCTACCGCT
CCGATTCGCC GAACGCAATT TTCGGCAGTC CCTGACTTGA CATGGGTGTT GGATGCTAGT
TGCTTTGATG TTGATCGAGT CAAAGACGTC GACCGTGCGT TAAACGAAAT TGAACATTGC
TCAGATCACT CTCATCAGCA CGATCATGGC AAAGAAGCGA CGTGTTCTAT TTGTTTCGCT
CACAAGCATA CCGCATCTGT ATCCACACTG GCTATTGTGG AGGAAGGGAG TGTCGATCTT
CGCAAACTGG ACCAGTGGTT GGCTTCGCTG TTGTGGCCCA ATCAAGACGA GCAAGACAAA
GTTTTGCGTG CCAGGTTAGA CGGAGTCGAA ACTACGCACG CAGCTCGGCC AAGATCGGAT
GAGAGTATTG TATCGTCCAC TACCGAACTC TATCGTATCA AGGGAATTTT GTCCGTGGGC
TACAATATGG ACTACACGGC CATCAACGCG GACGCAGCGG TCGAATTCAC GGACGACCAC
GGTTTGGACT CTCGACGATT TATTGTTCAA GCCGTGCATG ATCTCTGGGA GACGCATCCA
GCGAGTCGCG AGCTACGATG GGATAGTGAG GAAGTACGAG ACTGCAAGGT TGTTTTTATT
GGCCGCAATC TGAAGAAAGA GGATCTGCGA AAAGGGTTTC TATCGTGTAT GCTACCATGA
|
|---|
| Protein sequence | PVTILSGFLG SGKTTLIQYI LKSPDHGKRI AVIENEFGEG LAVESMIARD GVDNGSLIDL
IELPNGCICC TVKDSLVSTL ELLLQRRRDL DYILIECSGM ANPGPIASLF WLDEGLSRLR
LDGIVTLVDA AHLERQLGAT KEAAQQIAYA DRILLNKVDL VDEASALRLL NLIRTIHPTA
PIRRTQFSAV PDLTWVLDAS CFDVDRVKDV DRALNEIEHC SDHSHQHDHG KEATCSICFA
HKHTASVSTL AIVEEGSVDL RKLDQWLASL LWPNQDEQDK VLPVEFTDDH GLDSRRFIVQ
AVHDLWETHP ASRELRWDSE EVRDCKVVFI GRNLKKEDLR KGFLSCMLP
|
|---|
| |