Gene PHATRDRAFT_9724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_9724 
Symbol 
ID7197329 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp964854 
End bp966112 
Gene Length1259 bp 
Protein Length371 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177727 
Protein GI219111951 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTGCTATAG TCGGTTATGT CTTTACAGAT CGGCTTGTCC CCCACATAAA GAGCTACACG 
TTGCGAAAGG GAATCGCAGG GAAAGATTTG GGCAAACGAG GGACTTCAAT TGCCGATAAA
GATGTGTAAG TTGCAATTCT GTTGACTGTG AAAAACAAAC TTCCAGGGAA TAGGCGTTAT
CGAATCTTTT TCTTACGCTT TCCGTCCTGC AAAGACCCGA AGCCCTCGGT ATCGTCGCAG
GTGCCGTATT TCTCGTATGT TTAATATTTT GCTTGGTAGG GTATGCCGCT TGGCATCCCA
GCAAGTTGTT GGATATGAAC TCGGCATTGC TCTCGATATG TTTCATGCTA TTTTTGGGCT
TTACGGACGA CGTGCTAGAT TGGCCGTGGC GCTACAAGCT CTTTCTACCC AGCGTCGCTT
CTCTTCCACT TTTATGTTGC TACAATGGAA GCACCTCGAT TGTTGTTCCC ATTCCTATGC
GCTCTTGGCT TTGGCATGAC AAATCTGCAA CCTTATTGGG GCATGTATTG AGCCCTCTTA
TTGTCGTTGA CGCCAACGCA GAAGGTTCAC TGGTTGAGCT CGGCTTCCTG TATCTGTTGT
ATATGGGTTT GTTAGCAGTC TTTTGCACGA ACGCCATCAA CATTTACGCC GGTATCAACG
GGTTGGAAGC GGGGCAATCG TATATAATTG GCTGTGCCGT GTTGGTCCAC AACCTGCTCG
AAATTCGATT CCACAACAAT CTGGAAGAAA ACCATTTGTT TTCCGTCATG GTCATGTTAA
GTTTTGTCGG AGTCACATTG GGATTGCTCA AACACAATTG GTTTCCAGCA TCCGTCTTTG
TGGGCGACAC CTTTTGTTAT TTTGCCGGTA TGACATTTGC TGTTGTAGGT ATTCTGGGGC
ATTTCTCCAA GACTCTTTTG CTGTTTTTTA TTCCACAAGT CATCAATTTT GTGTGGTCTG
TTCCTCAATT GTTCAAATTT GTCCCGTGTC CCAGGCACCG ACTGCCCGCC ATCAACGCTG
ACACGGGTCT GATGGAGCCA TCCACCTTTC CTTGCCAACC ACACGAATAT CGAATACTGA
AACGTCATCC CAACGATACA ACGGTGCCAA ACATGACCGT CATTAACCTT TGCCTACAAC
TGGTGGGCCC CATGAGTGAG CGGTCGTTGT GTATTTTACT GCTCGCTCTA CAAACTTTAT
CGTGTGGGCT CGGAATGCTC TGTCGGTACT ACATTGCCAA CTTCTTTTTC GACGATTGA
 
Protein sequence
LAIVGYVFTD RLVPHIKSYT LRKGIAGKDL GKRGTSIADK DVPEALGIVA GAVFLVCLIF 
CLVGYAAWHP SKLLDMNSAL LSICFMLFLG FTDDVLDWPW RYKLFLPSVA SLPLLCCYNG
STSIVVPIPM RSWLWHDKSA TLLGHLGFLY LLYMGLLAVF CTNAINIYAG INGLEAGQSY
IIGCAVLVHN LLEIRFHNNL EENHLFSVMV MLSFVGVTLG LLKHNWFPAS VFVGDTFCYF
AGMTFAVVGI LGHFSKTLLL FFIPQVINFV WSVPQLFKFV PCPRHRLPAI NADTGLMEPS
TFPCQPHEYR ILKRHPNDTT VPNMTVINLC LQLVGPMSER SLCILLLALQ TLSCGLGMLC
RYYIANFFFD D