| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_9210 |
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| Symbol | CRTISO5 |
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| ID | 7196241 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 1892763 |
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| End bp | 1894441 |
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| Gene Length | 1679 bp |
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| Protein Length | 530 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | CRTISO5 carotenoid isomerase 5,phytoene dehydrogenase-related protein |
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| Protein accession | XP_002176863 |
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| Protein GI | 219110223 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GATGTAATCG TGATTGGATC CGGTATGGGC GGGCTAGCTT GTGGCGCCCT GTCAGCTAAA
TACGGTGACA AGGTCCTCGT GCTAGAGTCG CACATTAAAT GCGGAGGATC GGCTCATACA
TTCTCCCGTA TGCACAACGG TGAAAAATAT TCCTTCGAAG TGGGTCCTTC AATTTTTGAA
GGACTCGACC GTCCAAGCCT GAATCCCCTT CGCATGATTT TTGATGTCCT GGAAGAAGAG
ATGCCCGTAA AAACTTACAC TGGTCTTGGA TACTGGACTC CCACGGGATA TTGGCGTTTC
CCTATCGGTA GTCAAAGCAA ATTCGAAGAT CTGCTTATGG AACAAGCGGA AGATGGCCCC
AAGGCTGTTG AGGTATGTTT CTTTCTGTTT CATGTTTCAT GTTGCCGGTA TCGGAGATCA
AATAAGCAAT CGCTCACCTT ACAAGCACTC TTTTTACCAA GGAATGGAAC ATGTTACGCA
AACGCCTCAA GACACTTGGT GGTTCTACAA CTGCAGTTTC GTTGTTGAAC CTACGTCAAG
ATCCTGGTTT TTTAGCGACA ACAGCTGGTA GTTTGCCTTT TGTGGCAACG CATCCTGATG
TGTTTCTCGA CTTGTCGCTT ACGTTTGATT CTCTCCACAA GACGGTTGAT AAAATTGTGA
CGGTCCCTTT CCTCCGAAAC TTTATCGATA CCATGTGCAT TTTCTGCGGC TTCCCAGCCA
AGGGCGCGAT GACGGCGCAC ATGCTTTATA TCTTAGAGCG CTTCTTTGAA GAGTCAGCTT
GCTATTCTGT TCCGATTGGA GGTACATGCG AAATGGGAAA CACATTGGTA CGCGGCTTGG
AAAAGTTTGG TGGCAAAATC CAGTTGAATG CTCACGTAGA CGAAATTTTG GTCGAAAACG
GACGTGCCGT GGGTGTTCGT CTCAAGAACG GAAATGTTGT TAAAGCAAAC AAAGCCGTGG
TGAGCAATGC CACGCCTTTT GATACCGTGA AGATGCTTGG AGAAAAACAA GCACTTCCAG
AAGGTGTCGC GAAATGGAAG GAAGAGCTTG GGAAACTCCC ACGTCACGGA GCGATTATGC
ATTTATTTTT AGCTATTGAT GCGAAGGATC TGGACCTTTC GCACATTCAA GACCCCGCTC
ATTTAGTAGT TCAAGACTGG GGACGTTCTT TACAAGACTC GCAGAACTTG TGTAGCTTCT
TCATTCCTAG TTTACTTGAC AAGACGTTAT GTCCGGAAGG CAAGCATGTC ATTCATGTAT
ACTCTTCTGG AGGGGAACCG TATGAGCCGT GGGAAAAGCT CAAGCCAGGG ACACAGGAGT
ACGACGATTA CAAAAACGAA CGCGCTAAAG TTTTGTGGGA AGCAGTCGAA AGGTGTATTC
CAGATGTTCG GGATCGCTTG GAATTTTCCA TAGTCGGATC CCCTCTTGCA CATGAAGCCT
TTCTTCGACG TGATCGAGGT ACGTATGGAA TGGCATGGGC TGCTGGTACA TCAGCGCCCC
AGGCCGGCCT TCTTCAGAAT ATTCTCCCTT TCCCATTCCC AAACCTTAAG ACACCAGTCG
ATGGTCTCTT ACGATGCGGC GACTCCTGCT TTCCCGGTAT CGGAACTCCA AGTGCGGCCG
CCTCGGGAGC GATTGCAGCG AACACAATGA ACCCCGTCGG CAAGCATTTA GATTTGCTG
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| Protein sequence | DVIVIGSGMG GLACGALSAK YGDKVLVLES HIKCGGSAHT FSRMHNGEKY SFEVGPSIFE
GLDRPSLNPL RMIFDVLEEE MPVKTYTGLG YWTPTGYWRF PIGSQSKFED LLMEQAEDGP
KAVEEWNMLR KRLKTLGGST TAVSLLNLRQ DPGFLATTAG SLPFVATHPD VFLDLSLTFD
SLHKTVDKIV TVPFLRNFID TMCIFCGFPA KGAMTAHMLY ILERFFEESA CYSVPIGGTC
EMGNTLVRGL EKFGGKIQLN AHVDEILVEN GRAVGVRLKN GNVVKANKAV VSNATPFDTV
KMLGEKQALP EGVAKWKEEL GKLPRHGAIM HLFLAIDAKD LDLSHIQDPA HLVVQDWGRS
LQDSQNLCSF FIPSLLDKTL CPEGKHVIHV YSSGGEPYEP WEKLKPGTQE YDDYKNERAK
VLWEAVERCI PDVRDRLEFS IVGSPLAHEA FLRRDRGTYG MAWAAGTSAP QAGLLQNILP
FPFPNLKTPV DGLLRCGDSC FPGIGTPSAA ASGAIAANTM NPVGKHLDLL
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