| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_55162 |
|---|
| Symbol | |
|---|
| ID | 7199098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011696 |
|---|
| Strand | + |
|---|
| Start bp | 88107 |
|---|
| End bp | 89659 |
|---|
| Gene Length | 1553 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185122 |
|---|
| Protein GI | 219129914 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.662149 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGTTACTACA GTGGACGACC CACATTCCGC ACGGAAAGAC TTGCCGTAGC CGCTATACAC
AGTAATCGGT TGTATATAAC AAAGAGTAAG CTCTTTGACC GAGAAGACAG GAACGTAGCA
TCATGCATTG GTACCAAGTC CAAATGCAGT TTACGCTGGT GCTAAGCTTT GCAATCTGCG
GTCTCACACA AAGCGGTACA TCATGGGACA CTGTGCGGCT CGTGCCAGTG GAAGACCCAA
CCCAGTCTCC CGAAACCTCG TATCGCTCCG AGGACGACGC TTCGTTTGCG ATATATTCGA
GAAATCTGTC TTCTGTTCTG GGCGACAAGC AAACTTTTTA CAACGACTTT ATGGAAGGAT
GCCGCAAGGC TGTGATGGAA TCAGGATCCG ATCCTGATGT TGTGTGCGAC AAAGATGATG
GCCACCGAAT GCGTATGAAT GTCTACCAGC CTCAGTCGGT AGTCAATTAC ACCAAGACTG
GATTTGCAAA AGTGAAAACC CCTCCCGAGG TCTTTCGTTT GCTCAAAGAG TTCTGGGATT
TGAACAAAGA AAAATCCTAC GTAGAATGGA GTGGGCCAAC ACCGTACCAC AACAATTGGG
AAGTGCCACC GACGGTCATT CGCGTCGACA ACACTACTTT AGAAACCGGC GGCATCGAAT
TACAAAGGGC TATATCAAAT GCTGCGAAAG CTCTCATGGA GGAATGGACT GGGCAGCGTC
TTTCCTATTC TTCGGTCTAC GGTATTCGCA TTTATCATAA TCAATCCGTG CTGTCGCCAC
ACGTGGATCG ATTGCCACTC GTCAGTTCCG CCATTATCAA CGTGGCGCAA GATGTCGACG
AAGATTGGGT TTTGGAGGTA TACGATCATG ATGGAGTTGC CCATAATGTT ACTATGGAGC
CAGGTGACAT GGTCTTATAC GAGAGCCATT CGGTCATTCA CGGGCGGCCA TTCCCTTTAC
AAGGTATGTA CTCGTCTTTC ATATGAATTC TAGGGGATTA TGTCCGTCGT TGACTGACAT
CTCTCTCTCT CGAACCGCTT CGCAGGAAAA TTCTTCGCCA ATTGTTTTGT GCACTTTGAA
CCGCTTGGGC CGCTCGATCA ATCTGAAATC AGCGTGAATA ATGGTGATTT ACCTCCATAC
CTTATTCCCG GCTCGCAGTG GGAAGCAGAA TACCGCCTCA AACACCCAGA CGGTTGGAGT
GTTTTGAGCG ATCCCATGTC TCTCATTCAA AGCGGAGATT TGCCTCTCTT GCGATATGTC
GGCAGGAACA AGCCGGAAGT CCTTCATAAA CCGGACAAAA TAGACTGGAG ACCAATCCAT
GAGGTTTGCC GACAAGGAAA TCTGGAAATA TTGAAGTACT TGGTCGAGCA AGACGCTGAC
ATACATGCCG TCACAAAGGC ATACGGTAAT TCGGAGCCGC TTGACATTGC CAAACGATAT
CTGGCCTCCG ATGATCCGGT AATTGAATAT CTCGAGGAGA AACTACGGGC AGAAGAAAGC
GATCATTCCG AGCTTTAAAC CAGCCAATTA GTTTATTCTT TTTATAGCAC GCT
|
|---|
| Protein sequence | MHWYQVQMQF TLVLSFAICG LTQSGTSWDT VRLVPVEDPT QSPETSYRSE DDASFAIYSR
NLSSVLGDKQ TFYNDFMEGC RKAVMESGSD PDVVCDKDDG HRMRMNVYQP QSVVNYTKTG
FAKVKTPPEV FRLLKEFWDL NKEKSYVEWS GPTPYHNNWE VPPTVIRVDN TTLETGGIEL
QRAISNAAKA LMEEWTGQRL SYSSVYGIRI YHNQSVLSPH VDRLPLVSSA IINVAQDVDE
DWVLEVYDHD GVAHNVTMEP GDMVLYESHS VIHGRPFPLQ GKFFANCFVH FEPLGPLDQS
EISVNNGDLP PYLIPGSQWE AEYRLKHPDG WSVLSDPMSL IQSGDLPLLR YVGRNKPEVL
HKPDKIDWRP IHEVCRQGNL EILKYLVEQD ADIHAVTKAY GNSEPLDIAK RYLASDDPVI
EYLEEKLRAE ESDHSEL
|
|---|
| |