| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54992 |
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| Symbol | |
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| ID | 7195298 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011688 |
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| Strand | - |
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| Start bp | 429030 |
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| End bp | 430621 |
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| Gene Length | 1592 bp |
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| Protein Length | 458 aa |
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| Translation table | |
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| GC content | 58% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183745 |
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| Protein GI | 219127025 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.030257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CACATCACGC ATCAACTTTA GTATCAACAC TGGTATCAAC CACAAGCAAT CAACACTGCC
TCCTATCATG ACTGCTGCTG TTGCCGAAGT CACGAACGTG TACCATCGTC CGGACGGGAT
CCGTTCCGCC TCCACGACGC GTTCCGATTC CCACGGCGAC GCAACGGAGC ACCAGCACGA
GAACGTCGTG TACAGTCCGG AGCTCTTGTC CGTCTACTAC GCTCGTCTCT TCCCGTACTC
TCTGTTGCAC ACGTGGCTTT CCTACGGCAC CCGCGACCCC ACCGTCTTTG CGCACCGCGA
GTTCTCCTTC ACCATCGAGC CCGTGCCGGG CGAAGAAATC TACCTTCGCT ACCAATCCTT
CCGCAACGAG TCCGAACTCG CCGCCGCCGT CCGCCAACGC CGCCCCACCA AAATTGACAT
TGGCGCCGTC TTCTCCCACG CCCCCCGGGA CCGCGCCGTC GTCCCCACCC TCCGACCCGT
CCAACGCGAA CTCGTCTTCG ACATTGATTT GACCGACTAC GACGACGTGC GCGCCTGTGG
TTGTACCGGC GCACGCATTT GTCCCGTTTG TTGGGGATTC ATGCGGACTG CCGTCGCCGT
CATGGATACC GTGCTCCGTG ACGATTTCGG TTTCGGGCAC GTGGCCTGGG TGTATTCCGG
ACGACGGGGC ATACACGCTT GGGTCTGTGA TCCCGCCGCC CGGGAACTCA CCGATGCCGC
ACGAGCCGCC GTGGCGAGTT ATTGTGAAGT ACGTATATGT GTATTTGTAT ATGAGTGTGT
GTATATATGT ATTGGTGTGT GTATGTGTTG ATGTAATTGT GTATTGGTCT GTTCGTGTAC
AAATATATTG GTATCAATAC TAGGCATCAC CGACTCACTC CACGGCTCCA TTTCGTCAGA
TCCAACTGGG TTCGGACCAG AACCAGCAGG TCGTCTTGAC CCATCCGTTG CATCCCGCCA
TTCAGCGGGC GTTACAAGTT TTGGAGCCGT GGTTTGTGGA GCACGTGCTG CCGGCGCAAG
GGCACGGCCT CTTGGCGACG CCCGCGGCCT GCGACGCCTT TCTCCAAACC ATCCCCGACG
CCGCCGCCAC CGTACGCGCC CATTTGCAAA CATCCTGGGC CACACGCACA CACGCACCCG
CCGAAAAGTG GCGGGAAGTC CGGACCCATT TCCAAATATT CTTGGAAAAA TCCGCCACGG
CCAAAGTGCG CAAGACCATG TCCTTGCCGG AACGGGAGCG ACTCGAAACC TGGACCGCCG
GTGTCGTCCT GCGGTACTCC TATCCCCGAC TCGATATTAA CGTTTCCAAA ATGCGCAACC
ATTTGCTCAA ATCGCCCTTT TGTGTACACC CCAAAACTGG ACGCGTCTGT GTCCCCATTG
CCGATTTCGA AACCTTTGAT CCCTTTGCCG TACCCACCCT GCCCCAACTC GTTCGCGAAC
TCGACGAATA CCATTCCACC AATGCTAGTA CTAGTACTCC AACCTCCGAC AGTACCACGC
ACCCACCGAC AGCCGGACCG GATTGGCAAA AAACGTCACT CCGGGCCTAC CTCGAACCCT
TCCAACGCAA TTTTCTCGAA CCACTGGGTC GG
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| Protein sequence | MTAAVAEVTN VYHRPDGIRS ASTTRSDSHG DATEHQHENV VYSPELLSVY YARLFPYSLL
HTWLSYGTRD PTVFAHREFS FTIEPVPGEE IYLRYQSFRN ESELAAAVRQ RRPTKIDIGA
VFSHAPRDRA VVPTLRPVQR ELVFDIDLTD YDDVRACGCT GARICPVCWG FMRTAVAVMD
TVLRDDFGFG HVAWVYSGRR GIHAWVCDPA ARELTDAARA AVASYCEIQL GSDQNQQVVL
THPLHPAIQR ALQVLEPWFV EHVLPAQGHG LLATPAACDA FLQTIPDAAA TVRAHLQTSW
ATRTHAPAEK WREVRTHFQI FLEKSATAKV RKTMSLPERE RLETWTAGVV LRYSYPRLDI
NVSKMRNHLL KSPFCVHPKT GRVCVPIADF ETFDPFAVPT LPQLVRELDE YHSTNASTST
PTSDSTTHPP TAGPDWQKTS LRAYLEPFQR NFLEPLGR
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