Gene PHATRDRAFT_54956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_54956 
Symbol 
ID7195134 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011687 
Strand
Start bp402160 
End bp403054 
Gene Length895 bp 
Protein Length167 aa 
Translation table 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionXP_002183482 
Protein GI219126475 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.920097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACGCACGGTG CTTTCGCTTC GGTAGCGACC AGCCACAAGA TTGTTTCATC CGCAATGGAA 
AAGTACCGGC TGATCCAGGA AAGCAAGGCG GATGAACACG ATTTGGCCCA TGGCGCGAAT
GCTGCCTCGT CAATGCTCGA ATTTCCAGAA GTCCGCATCA CGCAGCAAGG AAAGCCACGT
AACTACATAT CGTACGCCAT GAATTTGTTT GTAAGTCTCA CTAGCGATTG CGTGCGTTTG
GGCGGGCGAT TCCCGTGGGT GAGATTTCGC CGCATCCTTA GTTCGACAGG TCACAGTGCA
GTCAAACACT TTCAAACAAC TAGCTTAGCG CCACATCGAG GTTTGTACTC ACTGATTTTT
CATGGTTCAC CTGCAGTCGG ACGGCTCGCC AACAATTGTG CTCAAAGCAA TGGGAAAGGC
CATCAACAAG GCAGTAACGA TCGCAGAAAT TCTTAAACGC AAAATGTTTC TGCACCAGAT
CAACAGTTTG AGTTCCGTCG AAATGATTGA TGTATACGAG CCGGTCGAAG AAGGTTTGGA
CTTGGTCACT AACCGTCGCT TTGTATCGTG CATGAAAATC ATCCTTTCCT TGGAACGACT
CGACAGTTCT CATTCTGGCT ATCAAACACC CCTGGCTCGG GAGGAGATGC ATCCTGGAGA
TTATCATCCG ACCGTTGGTT CGAGCAAAAC ATCCGCTACA CCAATGATTT CATCAAATGG
ATGAGCTTTC CAAAAGATTC TACCCTCCGC AAGAAAACCG GTCGCAAAGC TCTCGTTCTT
GAACTCACTT TAGCTTCCCG CCATCATTGG TGAGCGTGAA AGCTTGTTCT CACTGCCGCA
ATCAAAACGA CGAGACCTAT TAAGCAAACC TAGCACTTTG AGTATTTATC TTTGC
 
Protein sequence
MEKYRLIQES KADEHDLAHG ANAASSMLEF PEVRITQQGK PRNYISYAMN LFSDGSPTIV 
LKAMGKAINK AVTIAEILKR KMFLHQINSL SSVEMIDVYE PVEEGLDLVT NRRFVSCMKI
ILSLERLDSS HSGYQTPLAR EEMHPGDYHP TVGSSKTSAT PMISSNG