| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54826 |
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| Symbol | CRTISO2 |
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| ID | 7203219 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011683 |
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| Strand | - |
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| Start bp | 645646 |
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| End bp | 648008 |
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| Gene Length | 2363 bp |
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| Protein Length | 635 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | carotenoid isomerase |
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| Protein accession | XP_002182438 |
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| Protein GI | 219124285 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0698106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GGTCCTACCT ATCTGTTAAT CGGTATCTCT GTTGGGGTGG CGGAGGCAAA TTAGACCAGC
AAACGTATTG GAAGACTGAC ATCGTGTTCA CAGTAAAGCC CACCGCAGAT TATTTGGTTA
CAGTAAGCTG TGATTAACTT GATTTTCCCA GACAATGCTT GTGGAGAGCA AAAAAAGCCG
AGATGGTAGT CGCACTTCGA GCCGTTCCCT CGATACCAAA ACACATTGCG TGTGCTCTAC
TAGCAAACAA AACTCTGTCA GACCAGCAAA TACTCTGCTG CGATCGCGGG CAAGGCACAC
GTTGATTTGG CTTGTCTTTT ACGTGTGGGA GTGGAATACC ACCACGACGG CATTTGCACC
CTCACCTTCT CGAATTGCAG CTTTTCGAGC GTCGCGTGGT CGCAAGCTAA CCACATCAGT
ATCGAGTCTA GTTAGCGGTG ACAAACGTGA CTGCGCGTCC CCAGCAGACG ATCTGGTGGA
CGTGGCAATT ATCGGCGCAG GTCTGGGTGG ACTGTGCGCG GGCGCTATTC TTAATACGCT
CTACGGTAAG AAGGTGGGTA TCTACGAGGC ACATTACTTG GCCGGAGGCT GTGCACACGC
CTTTGATCGG CGCGCCGCCG ACGGTGTAAA TTTCACCTTT GATTCCGGCC CGACCATTCT
GTTGGGATGC TCAAGTCCAC CCTTTAATGC CTTACAGCAA GTCTTGGACG CTGTGGGTCA
AAAGGTTGAA TGGATAACGT ACGATGGATG GTAGGTAAAC AATGCTTTTC AAAATTACCC
ATTACCCGGT TGTGCCGCAC GGATAAGTAG CTTTATGATT CTGACTAAAT TGAACGTATG
TCCTCAGGGG TATGATCGAG AATCCAGGAA AGGACAATGA ATTGCGGTGG AAAGTCATAC
TGGGACGGGA TGAGTTTCAG CGCGGTCCAC TCACACGGTT TGGGGGACCC AAAGCCTTGG
AGGAGTTCGA AGCGCTACGA GAAGCAACCA AGGATCTTTT GGCTGGCGCC AAAATACCTG
CCATGGCTAT GCGTCCCGGT CCAAGTGCCC TGGTACCACT CATCCGGTAT TTTTCGACAC
TGGTTACCTT GCTTTCCCAG GGATCAAAGG CAACGGGAAC GTTTGCGTCA TTTATTGACG
GGCCCAATTT CACTGTAACG GATCCGTGGC TGCGATCGTG GCTGGATGCT CTCGCCTTTT
CCTTATCCGG GCTACCCGCT AGTCGAACCG CAGCCGCCGC CATGGCGTTT ACACTCAGTG
ACATGCACCG CCCCGGTGCA GCGTTGGACT ATCCCAAGGG CGGTATGGGA GCAATCGCTG
AGGCCCTTGT CAGGGGAGTA CAGCAAGGTT CGAACGGTTC TCAGGTACAC TTGCGGCAAC
CTGTGGAAAA AATTGACTTT AGTGAGGACG GTACCATCGC TACGGGGCTG ACGCTACGCA
ACGGAAGACG GATACTTGCT CGGGAAGGGG TGATATGCAA TGCACCAGTT TGGTCCCTGA
AGAGCTTAGT TAAAAACGAG AAAGCCTTGC AAAAGCTCAA CAACGATCTT CCTATTATCA
ATCCGCGTCC AAGATCTTCT TGGACGACCA CGGACGAAGG ATCATCGATT CACCAACAGC
GTCCAACTCG ATCCGGAGAA GCGGACGAGA CTCTCTTGGG TGCCTGCGAT ACGGCAGAAA
AGACCGGCTC CTTTTTGCAT CTGCATTTGG CGCTGGAATC TAGTGGCCTG AACTTGGACA
ACTTGGAAGC TCACTACACT GTGATGGACC GATCGTTAGG AGGGGATGGG TCCTCCGTAA
ATGGAGTCTT GGACGGACCC TGCGGAATAC TTAACATGAT TGCCGTCTCG AATCCCTGCA
AGATTGACAA TAGTCTAGCT CCCGACGGAA CCATTGTGGT ACACGCTTAC AGCGCCGGCA
ACGAACCTTA CGAAATTTGG GAGGGACTAG ATCGAAGAAG TGACGGGTAT ATGTGCCTTA
AGGAAGACCG AGCTGAAGTG CTATGGCGCG CTGTGGAGAG TATTATTCCT GATGCGCGCA
ATCGTGTCGT GATTAGTGAG ATTGGATCTC CTATCACGCA CGAGCGTTTC TTGAACCGAC
CTAGAGGAAC ATATGGTAGT GCCACTGAAG ACTACCTTGC GGACGGTAGT ACATCGATCG
GGAATTTGCT TTTGGCTGGC GACGGGATTT TCCCCGGTAT CGGTTTGCCC GCAGTGGCGA
TCAGCGGGGC CAGCGCAGCG AATGCAATGG TGAGCGTATT TAAACAGTGG GAATGTCTAG
ACGAGTTGGG CAAAAGCCAA AAGCTATAGC TTGAGAAAAT AGGCAGGAAG ATTGTTAAAT
TTAGAACATT GCTTTGGAAA GTG
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| Protein sequence | MLVESKKSRD GSRTSSRSLD TKTHCVCSTS KQNSVRPANT LLRSRARHTL IWLVFYVWEW
NTTTTAFAPS PSRIAAFRAS RGRKLTTSVS SLVSGDKRDC ASPADDLVDV AIIGAGLGGL
CAGAILNTLY GKKVGIYEAH YLAGGCAHAF DRRAADGVNF TFDSGPTILL GCSSPPFNAL
QQVLDAVGQK NPGKDNELRW KVILGRDEFQ RGPLTRFGGP KALEEFEALR EATKDLLAGA
KIPAMAMRPG PSALVPLIRY FSTLVTLLSQ GSKATGTFAS FIDGPNFTVT DPWLRSWLDA
LAFSLSGLPA SRTAAAAMAF TLSDMHRPGA ALDYPKGGMG AIAEALVRGV QQGSNGSQVH
LRQPVEKIDF SEDGTIATGL TLRNGRRILA REGVICNAPV WSLKSLRPTR SGEADETLLG
ACDTAEKTGS FLHLHLALES SGLNLDNLEA HYTVMDRSLG GDGSSVNGVL DGPCGILNMI
AVSNPCKIDN SLAPDGTIVV HAYSAGNEPY EIWEGLDRRS DGYMCLKEDR AEVLWRAVES
IIPDARNRVV ISEIGSPITH ERFLNRPRGT YGSATEDYLA DGSTSIGNLL LAGDGIFPGI
GLPAVAISGA SAANAMVSVF KQWECLDELG KSQKL
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