Gene PHATRDRAFT_54319 details

Gene Information

• Locus tag: PHATRDRAFT_54319
• ID: 7199818
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011673
• Strand: -
• Start bp: 598808
• End bp: 600852
• Gene Length: 2045 bp
• Protein Length: 607 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002179029
• Protein GI: 219116468

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ACGCATTTCG CAAAGAGAAC CTATTCGGAA CTAAGTACGT TGCATCAATT GACCATGAAG 
TTTTTACCAA CGGCTCTAGC CTTGTGGCTG TTTCAAGAAG TACTTGCTAA CGACAATATT 
TCGCAAGCTA CGGAAGATAC TACGACTTCT CGCCACCTCC GCAAGCCCAA GAAGACGAAA 
TCGATCCAAG CCACTTCAGT ACTCACAGTC AATGAAAATC CACCACTTTC TCCCGTCATC 
GCTGAATCTC GCATCGTTGG TGGAGAAGAT GCCAGTGTAG GAGAATATCC ATACTTCGTT 
CTGGGTAACG GATGCGGGGC TAGCTTGATT TGGAAAGATA TCGTTCTCAC TGCTGCCCAC 
TGCGGCAACG CCTTCAACAA TCGAGTTCTT GTGGGTGCGT ATCGGTATTG GTCCACCAAT 
TTCGAGGCCG AGTGGATCAA TGTTGCACAG ACTGTGCGCC ATCCAAATTA CAATGGAAAT 
ACGGAGGCCA ATGATTTTAT GATTGTCAAA CTGAGTTCTG CTTCCAGTGC GACGCCTGTC 
ATAATCAACA TGGACGCCAG CAATCCGTCT ATCAACGAAA GTCTGACAAC GATAGGCTTC 
GGTGCAACCA CTGAAGGTGG ATCTGGCAGT AACATTCTCC AAAAAGTGAC ACTTAACTAC 
ATCAACCCAA ATACCTGTAA TTCTCAGTAT GGCGGTCAAA TCCAAGAAGA TATCATGATG 
TGTGCCGGTG TACAGGGGGG CGGTAAGGAT AGCTGCCAGG GTGACAGTGG AGGCCCGATC 
ATGGATTCTG ACGGTGTTCA AGTAGGAGTC ACCAGCTGGG GTATCGGTTG TGCCCGACCT 
AACTACCCCG GTGTGTACTC GCGTATTTCT GGTGTTAAAG ATTGGATCAA TGGACAAGTC 
TGTGCGCTGT CAAGTGACCC CCCTCCCTCT TGTGGTGGCG GCGGAGGAGG AGACTCTGGT 
GGTGGTGGCG GCGGAGGAGA CTCCGGTGGT GGTGGGGATG ACACAGGCTT CACCGTTCGT 
GTTGTCGTAA AACACGACGA TTATCCTGAA GAGACAGGAT GGACGGTTTT TGGGTCCGAC 
AACGCCGTCG TTTTGAGTCA AACTGAGGGT GAGTTTCAAC AAGATGGTGG GACGGTGGAC 
AAATCAGCTT TTGTTGAAGA GGGTCAATAC ACGTTCAAAA TCGTGGACAT GTATGGCGAT 
GGTATCTGCT GTGGCTTCGG AAGAGGAGAG TTCGATGTAT ATGTCAATGA TGAACGAGTT 
GGTGGAGGCA ACGGTCAGTT CAATTCCGAA ACGTCCTTCT CATTTACTGT TGGAGAGACC 
AGCGAAGAAG AGCCGTCGTT GGTTTTCAAA GTGGACGCGC AGTATGATGC ATGGCCTGGC 
GAATTTTCCT GGTGGATCCA GGATCGTACC ACCAACTCCA ATATTGTCAG GTACAATGCT 
GGCGAAGTCA CCGAACAAAA CGCCTTGGTG TCGGAAACGC TAGACCTCGT AGCAGGACGC 
CTCTACACGT TGCGCTTGCG AGACTCGTAC GGCGACGGCA TTAACGTTGG AGGCGATGGT 
TTCGTGGAAG TCTATGCCAT GGTCGATGGC CAAAAGCAGC GACTCATCTT CAACGACGGC 
AATTTTCGTT CTAGGTGGAA CAAATCCTTC CGTGTCCCCG CTGACCTGTC TCGCATTGGC 
GATGCTGTTA TGATCGAACT GGAAGACAGC GTGGACAACG AAAAAAGTGA TGGCGACGAC 
GACAGCTGCA CGGATGGATG GGCGCTTTTC GACGTTTCCG CTCACGTAGG TCAACAAGGT 
TGCCATTGGC TTGCGGATAA CTATGATCGC TATGAGTTCC TCTGCGAGTT TGTCGATGTA 
GTGGTTGCGT GCCCCCATAC CTGTGGCCGC TGTGGCTTAT TTGTGTAAGG AGGCCCTCCT 
TCTTGCTTTA GGAAACGCTT GTTGTCTCTT TCGAAATAAC AAAACTCCAT TAGACACAAC 
GGATCAGCTT CACTCCGATG TGTCGCGAGC GAAGGGATAA CATAAAATCA ATTTACGTAT 
TCATG 

 

Protein sequence

MKFLPTALAL WLFQEVLAND NISQATEDTT TSRHLRKPKK TKSIQATSVL TVNENPPLSP 
VIAESRIVGG EDASVGEYPY FVLGNGCGAS LIWKDIVLTA AHCGNAFNNR VLVGAYRYWS 
TNFEAEWINV AQTVRHPNYN GNTEANDFMI VKLSSASSAT PVIINMDASN PSINESLTTI 
GFGATTEGGS GSNILQKVTL NYINPNTCNS QYGGQIQEDI MMCAGVQGGG KDSCQGDSGG 
PIMDSDGVQV GVTSWGIGCA RPNYPGVYSR ISGVKDWING QVCALSSDPP PSCGGGGGDS 
GGGGDDTGFT VRVVVKHDDY PEETGWTVFG SDNAVVLSQT EGEFQQDGGT VDKSAFVEEG 
QYTFKIVDMY GDGICCGFGR GEFDVYVNDE RVGGGNGQFN SETSFSFTVG ETSEEEPSLV 
FKVDAQYDAW PGEFSWWIQD RTTNSNIVRY NAGEVTEQNA LVSETLDLVA GRLYTLRLRD 
SYGDGINVGG DGFVEVYAMV DGQKQRLIFN DGNFRSRWNK SFRVPADLSR IGDAVMIELE 
DSVDNEKSDG DDDSCTDGWA LFDVSAHVGQ QGCHWLADNY DRYEFLCEFV DVVVACPHTC 
GRCGLFV